Strain Fitness in Escherichia coli ECOR38 around HEPCGN_12720

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,295,538	+				+0.4
1,295,552	+				+0.5
1,295,575	-				-0.1
1,295,575	-				+1.3
1,295,594	-				+0.4
1,295,891	+	typA	HEPCGN_12720	0.16	-0.5
1,295,946	-	typA	HEPCGN_12720	0.19	-0.8
1,295,991	+	typA	HEPCGN_12720	0.22	+0.4
1,295,991	+	typA	HEPCGN_12720	0.22	-0.0
1,295,992	-	typA	HEPCGN_12720	0.22	-1.7
1,296,020	-	typA	HEPCGN_12720	0.23	-1.7
1,296,149	+	typA	HEPCGN_12720	0.31	-0.6
1,296,150	-	typA	HEPCGN_12720	0.31	-2.0
1,296,218	-	typA	HEPCGN_12720	0.34	-1.9
1,296,375	+	typA	HEPCGN_12720	0.43	-0.2
1,296,396	+	typA	HEPCGN_12720	0.44	-3.0
1,296,396	+	typA	HEPCGN_12720	0.44	+1.2
1,296,446	+	typA	HEPCGN_12720	0.47	-0.8
1,296,447	-	typA	HEPCGN_12720	0.47	-1.8
1,296,491	+	typA	HEPCGN_12720	0.49	-1.6
1,296,492	-	typA	HEPCGN_12720	0.49	-2.6
1,296,701	+	typA	HEPCGN_12720	0.61	-0.8
1,296,701	+	typA	HEPCGN_12720	0.61	-2.5
1,296,702	-	typA	HEPCGN_12720	0.61	-0.4
1,296,702	-	typA	HEPCGN_12720	0.61	-1.3
1,296,705	-	typA	HEPCGN_12720	0.61	-0.3
1,296,766	+	typA	HEPCGN_12720	0.64	+0.1
1,296,766	+	typA	HEPCGN_12720	0.64	-1.2
1,296,766	+	typA	HEPCGN_12720	0.64	-2.1
1,296,766	+	typA	HEPCGN_12720	0.64	-0.3
1,296,766	+	typA	HEPCGN_12720	0.64	-0.6
1,296,766	+	typA	HEPCGN_12720	0.64	-1.3
1,296,767	-	typA	HEPCGN_12720	0.64	-0.9
1,296,767	-	typA	HEPCGN_12720	0.64	-1.0
1,296,776	-	typA	HEPCGN_12720	0.65	-0.5
1,296,857	-	typA	HEPCGN_12720	0.69	+0.3
1,296,881	+	typA	HEPCGN_12720	0.71	-0.8
1,296,881	+	typA	HEPCGN_12720	0.71	-0.7
1,296,926	-	typA	HEPCGN_12720	0.73	-1.3
1,296,985	-	typA	HEPCGN_12720	0.76	-0.4
1,296,985	-	typA	HEPCGN_12720	0.76	-0.9
1,297,038	-	typA	HEPCGN_12720	0.79	+0.4
1,297,140	+	typA	HEPCGN_12720	0.85	-0.5
1,297,140	+	typA	HEPCGN_12720	0.85	-0.1
1,297,152	+	typA	HEPCGN_12720	0.86	-0.5
1,297,152	+	typA	HEPCGN_12720	0.86	-1.1
1,297,152	+	typA	HEPCGN_12720	0.86	-0.5
1,297,153	-	typA	HEPCGN_12720	0.86	+0.0
1,297,254	-				-0.5
1,297,374	+				-0.7
1,297,374	+				-1.2
1,297,375	-				-0.7
1,297,375	-				-0.9
1,297,394	+				-0.3
1,297,394	+				-0.1
1,297,543	+				-0.0
1,297,604	+				+0.6
1,297,604	+				+0.2
1,297,606	+				+0.0
1,297,653	-				+0.4
1,297,672	-				+0.2