Strain Fitness in Escherichia coli ECOR38 around HEPCGN_08875

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
516,554	-	yaaU	HEPCGN_08865	0.54	-0.6
516,568	+	yaaU	HEPCGN_08865	0.55	-0.3
516,674	+	yaaU	HEPCGN_08865	0.63	-2.1
516,674	+	yaaU	HEPCGN_08865	0.63	-0.7
516,716	+	yaaU	HEPCGN_08865	0.66	+0.9
516,717	-	yaaU	HEPCGN_08865	0.66	+0.5
516,826	-	yaaU	HEPCGN_08865	0.74	+0.6
516,945	+	yaaU	HEPCGN_08865	0.83	+0.2
516,945	+	yaaU	HEPCGN_08865	0.83	+0.5
516,947	+	yaaU	HEPCGN_08865	0.83	+0.3
516,948	-	yaaU	HEPCGN_08865	0.83	-1.8
517,077	-				+0.7
517,129	-				+1.8
517,175	+				-0.6
517,373	+	fixX	HEPCGN_08870	0.50	-0.2
517,373	+	fixX	HEPCGN_08870	0.50	-0.0
517,670	+	fixX	HEPCGN_08875	0.12	-2.4
517,701	+	fixX	HEPCGN_08875	0.15	-0.1
517,712	-	fixX	HEPCGN_08875	0.16	+0.4
517,756	+	fixX	HEPCGN_08875	0.19	+0.3
517,775	+	fixX	HEPCGN_08875	0.20	-0.3
517,862	+	fixX	HEPCGN_08875	0.27	-0.1
517,862	+	fixX	HEPCGN_08875	0.27	+0.8
517,959	+	fixX	HEPCGN_08875	0.35	-0.2
517,972	+	fixX	HEPCGN_08875	0.36	+0.3
517,973	-	fixX	HEPCGN_08875	0.36	-0.2
518,105	+	fixX	HEPCGN_08875	0.46	-0.0
518,105	+	fixX	HEPCGN_08875	0.46	+0.1
518,117	+	fixX	HEPCGN_08875	0.47	-0.0
518,117	+	fixX	HEPCGN_08875	0.47	-0.1
518,226	+	fixX	HEPCGN_08875	0.55	-0.7
518,424	+	fixX	HEPCGN_08875	0.71	-1.1
518,425	-	fixX	HEPCGN_08875	0.71	+0.1
518,492	-	fixX	HEPCGN_08875	0.76	+0.2
518,537	+	fixX	HEPCGN_08875	0.80	+0.8
518,537	+	fixX	HEPCGN_08875	0.80	-0.9
518,538	-	fixX	HEPCGN_08875	0.80	+0.0
518,562	-	fixX	HEPCGN_08875	0.82	-0.7
518,595	+	fixX	HEPCGN_08875	0.84	-1.0
518,625	-	fixX	HEPCGN_08875	0.86	-0.2
518,647	+	fixX	HEPCGN_08875	0.88	-2.3
518,703	+				+0.9
518,703	+				+0.0
518,786	+				+1.3
518,798	+				-0.1
518,798	+				-0.5
518,798	+				-0.4
518,799	-				+0.4
518,858	+				+0.6
519,024	+	fixB	HEPCGN_08880	0.19	+0.2
519,024	+	fixB	HEPCGN_08880	0.19	-0.5
519,063	+	fixB	HEPCGN_08880	0.23	-0.2
519,064	-	fixB	HEPCGN_08880	0.23	+0.1
519,064	-	fixB	HEPCGN_08880	0.23	-0.2
519,064	-	fixB	HEPCGN_08880	0.23	+0.3
519,129	-	fixB	HEPCGN_08880	0.30	-0.5
519,466	+	fixB	HEPCGN_08880	0.65	-0.2
519,466	+	fixB	HEPCGN_08880	0.65	+1.4
519,467	-	fixB	HEPCGN_08880	0.66	+1.1
519,482	-	fixB	HEPCGN_08880	0.67	+0.8
519,509	+	fixB	HEPCGN_08880	0.70	+0.4
519,790	+				+0.3