Strain Fitness in Escherichia coli ECOR38 around HEPCGN_04585
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
796,667 | + | cheY | HEPCGN_04575 | 0.81 | +0.2 |
796,917 | + | cheZ | HEPCGN_04580 | 0.26 | +0.3 |
796,918 | - | cheZ | HEPCGN_04580 | 0.26 | +0.6 |
796,918 | - | cheZ | HEPCGN_04580 | 0.26 | -0.8 |
796,918 | - | cheZ | HEPCGN_04580 | 0.26 | +0.2 |
796,918 | - | cheZ | HEPCGN_04580 | 0.26 | -0.2 |
796,920 | + | cheZ | HEPCGN_04580 | 0.26 | +0.3 |
796,920 | + | cheZ | HEPCGN_04580 | 0.26 | -1.1 |
796,921 | - | cheZ | HEPCGN_04580 | 0.26 | +0.4 |
797,132 | + | cheZ | HEPCGN_04580 | 0.59 | -2.1 |
797,133 | - | cheZ | HEPCGN_04580 | 0.59 | -0.5 |
797,133 | - | cheZ | HEPCGN_04580 | 0.59 | -0.8 |
797,401 | + | +1.0 | |||
797,514 | - | -0.0 | |||
797,574 | + | -0.2 | |||
797,575 | - | -0.3 | |||
797,581 | - | +2.1 | |||
797,584 | - | +1.1 | |||
797,584 | - | +0.1 | |||
797,737 | - | flhB | HEPCGN_04585 | 0.11 | -0.2 |
797,811 | + | flhB | HEPCGN_04585 | 0.18 | -0.3 |
797,811 | + | flhB | HEPCGN_04585 | 0.18 | -1.1 |
798,042 | + | flhB | HEPCGN_04585 | 0.38 | -0.6 |
798,526 | - | flhB | HEPCGN_04585 | 0.80 | -0.7 |
798,693 | + | +0.6 | |||
798,693 | + | +0.3 | |||
798,694 | - | -0.1 | |||
798,694 | - | -0.9 | |||
798,853 | - | +0.7 | |||
798,890 | - | -1.3 | |||
798,899 | - | +0.4 | |||
799,009 | + | flhA | HEPCGN_04590 | 0.13 | -1.7 |
799,009 | + | flhA | HEPCGN_04590 | 0.13 | -0.0 |
799,010 | - | flhA | HEPCGN_04590 | 0.13 | +1.4 |
799,222 | + | flhA | HEPCGN_04590 | 0.23 | +1.0 |
799,352 | - | flhA | HEPCGN_04590 | 0.29 | -0.2 |
799,352 | - | flhA | HEPCGN_04590 | 0.29 | +1.6 |
799,469 | + | flhA | HEPCGN_04590 | 0.35 | -0.4 |
799,471 | + | flhA | HEPCGN_04590 | 0.35 | -0.8 |
799,471 | + | flhA | HEPCGN_04590 | 0.35 | -0.4 |
799,472 | - | flhA | HEPCGN_04590 | 0.35 | -1.5 |
799,624 | - | flhA | HEPCGN_04590 | 0.42 | -0.2 |
Or see this region's nucleotide sequence