Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HEPCGN_03685 and HEPCGN_03690 are separated by 314 nucleotides HEPCGN_03690 and HEPCGN_03695 are separated by 12 nucleotides HEPCGN_03695 and HEPCGN_03705 are separated by 685 nucleotides
HEPCGN_03685: HEPCGN_03685 - SMEK domain-containing protein, at 654,699 to 655,598
_03685
HEPCGN_03690: HEPCGN_03690 - Tellurite resistance protein TehB, at 655,913 to 656,566
_03690
HEPCGN_03695: HEPCGN_03695 - Uncharacterized protein YmfE, at 656,579 to 657,274
_03695
HEPCGN_03705: HEPCGN_03705 - protein hokC, at 657,960 to 658,172
_03705
Position (kb) 656
657
658 Strain fitness (log2 ratio) -2
-1
0
1 at 655.718 kb on + strand at 655.721 kb on + strand at 655.722 kb on - strand at 655.725 kb on + strand at 655.739 kb on - strand at 655.743 kb on + strand at 655.764 kb on - strand at 656.006 kb on - strand, within HEPCGN_03690 at 656.037 kb on + strand, within HEPCGN_03690 at 657.035 kb on + strand, within HEPCGN_03695 at 657.142 kb on - strand, within HEPCGN_03695 at 657.537 kb on + strand at 657.537 kb on + strand at 657.538 kb on - strand at 657.538 kb on - strand at 657.648 kb on + strand at 657.753 kb on + strand at 657.785 kb on - strand at 657.832 kb on + strand at 657.837 kb on - strand at 657.910 kb on + strand at 657.936 kb on + strand at 657.959 kb on + strand at 657.960 kb on - strand at 657.960 kb on - strand at 657.960 kb on - strand at 657.966 kb on + strand at 657.975 kb on - strand at 657.988 kb on - strand, within HEPCGN_03705
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 655,718 + +0.1 655,721 + -2.1 655,722 - -0.2 655,725 + -0.9 655,739 - -0.9 655,743 + -0.4 655,764 - -1.1 656,006 - HEPCGN_03690 0.14 +0.2 656,037 + HEPCGN_03690 0.19 -0.9 657,035 + HEPCGN_03695 0.66 -1.6 657,142 - HEPCGN_03695 0.81 -0.5 657,537 + -1.2 657,537 + +0.3 657,538 - -0.7 657,538 - +0.1 657,648 + +0.4 657,753 + +0.4 657,785 - +0.3 657,832 + +0.0 657,837 - +0.4 657,910 + -1.7 657,936 + -2.7 657,959 + -0.7 657,960 - -0.6 657,960 - -0.2 657,960 - -1.2 657,966 + -0.4 657,975 - -0.0 657,988 - HEPCGN_03705 0.13 +0.1
Or see this region's nucleotide sequence