Strain Fitness in Escherichia coli ECOR38 around HEPCGN_01445

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
219,055	+				+0.9
219,059	+				+0.6
219,196	+				+0.9
219,210	-				-1.0
219,522	-				+0.2
219,575	+				+0.7
219,576	-				+0.9
219,581	-				-0.5
219,581	-				-0.2
219,581	-				-0.4
219,591	-				-0.5
219,624	+				-0.1
219,624	+				+0.3
219,624	+				+0.1
219,633	+				-0.1
219,634	-				-0.5
219,664	+				-1.4
219,667	+				-0.4
219,667	+				+0.2
219,667	+				+0.2
219,668	-				-0.9
219,676	-	ybgC	HEPCGN_01445	0.12	-2.0
219,709	+	ybgC	HEPCGN_01445	0.20	-0.7
219,804	-	ybgC	HEPCGN_01445	0.43	-1.1
219,808	-	ybgC	HEPCGN_01445	0.44	-1.7
219,827	-	ybgC	HEPCGN_01445	0.49	-0.3
219,872	+	ybgC	HEPCGN_01445	0.60	-0.8
219,912	+	ybgC	HEPCGN_01445	0.70	-1.4
219,913	-	ybgC	HEPCGN_01445	0.70	-1.9
219,930	+	ybgC	HEPCGN_01445	0.75	-0.1
220,009	-				-1.3
220,043	+				-2.4
220,044	-				-1.4
220,224	+	tolQ	HEPCGN_01450	0.28	-1.9
220,367	+	tolQ	HEPCGN_01450	0.49	-0.7
220,368	-	tolQ	HEPCGN_01450	0.49	+0.3
220,368	-	tolQ	HEPCGN_01450	0.49	-1.1
220,443	+	tolQ	HEPCGN_01450	0.60	-0.3
220,603	-	tolQ	HEPCGN_01450	0.83	-1.4
220,603	-	tolQ	HEPCGN_01450	0.83	-1.6
220,604	+	tolQ	HEPCGN_01450	0.83	-1.4
220,604	+	tolQ	HEPCGN_01450	0.83	-1.6
220,780	+	tolR	HEPCGN_01455	0.13	-0.9
220,796	-	tolR	HEPCGN_01455	0.17	-0.1
220,944	+	tolR	HEPCGN_01455	0.51	+1.6
220,944	+	tolR	HEPCGN_01455	0.51	-2.0
220,945	-	tolR	HEPCGN_01455	0.51	-0.4
220,945	-	tolR	HEPCGN_01455	0.51	-0.4