Strain Fitness in Escherichia coli ECOR38 around HEPCGN_03270

Experiment: K25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K25
562,461	+	yeeE	HEPCGN_03260	0.29	+0.8
562,461	+	yeeE	HEPCGN_03260	0.29	-0.2
562,461	+	yeeE	HEPCGN_03260	0.29	-0.5
562,463	+	yeeE	HEPCGN_03260	0.29	-0.5
562,464	-	yeeE	HEPCGN_03260	0.29	-0.2
562,528	-	yeeE	HEPCGN_03260	0.36	-0.2
562,541	+	yeeE	HEPCGN_03260	0.37	+0.7
562,541	+	yeeE	HEPCGN_03260	0.37	+0.5
562,548	-	yeeE	HEPCGN_03260	0.38	+0.1
562,730	-	yeeE	HEPCGN_03260	0.56	+1.0
562,785	-	yeeE	HEPCGN_03260	0.61	-0.6
562,855	-	yeeE	HEPCGN_03260	0.68	-1.1
562,859	+	yeeE	HEPCGN_03260	0.69	+0.0
562,963	+	yeeE	HEPCGN_03260	0.79	+0.4
562,963	+	yeeE	HEPCGN_03260	0.79	+0.1
562,964	-	yeeE	HEPCGN_03260	0.79	-0.0
562,964	-	yeeE	HEPCGN_03260	0.79	+0.0
563,087	+				+0.1
563,173	-				-1.8
563,176	+				-0.5
563,177	-				+0.1
563,240	+	yeeD	HEPCGN_03265	0.23	-1.1
563,241	-	yeeD	HEPCGN_03265	0.23	+0.3
563,288	+	yeeD	HEPCGN_03265	0.44	+0.4
563,289	-	yeeD	HEPCGN_03265	0.44	+0.0
563,525	+				-1.2
563,558	+				-0.1
563,624	+	sbcB	HEPCGN_03270	0.12	+0.8
563,624	+	sbcB	HEPCGN_03270	0.12	+1.3
563,719	-	sbcB	HEPCGN_03270	0.18	+1.3
563,784	-	sbcB	HEPCGN_03270	0.23	+0.4
563,784	-	sbcB	HEPCGN_03270	0.23	+0.9
563,784	-	sbcB	HEPCGN_03270	0.23	-0.1
563,802	+	sbcB	HEPCGN_03270	0.24	+2.1
563,947	-	sbcB	HEPCGN_03270	0.34	+0.6
563,974	-	sbcB	HEPCGN_03270	0.36	+3.2
563,974	-	sbcB	HEPCGN_03270	0.36	+0.6
564,036	-	sbcB	HEPCGN_03270	0.40	+1.1
564,037	+	sbcB	HEPCGN_03270	0.41	+0.5
564,105	+	sbcB	HEPCGN_03270	0.45	+0.1
564,316	-	sbcB	HEPCGN_03270	0.60	+1.2
564,324	-	sbcB	HEPCGN_03270	0.61	-0.1
564,355	-	sbcB	HEPCGN_03270	0.63	-0.3
564,430	+	sbcB	HEPCGN_03270	0.68	+1.9
564,516	-	sbcB	HEPCGN_03270	0.74	+0.1
564,531	+	sbcB	HEPCGN_03270	0.75	+1.2
564,610	-	sbcB	HEPCGN_03270	0.81	-0.2
564,717	-	sbcB	HEPCGN_03270	0.88	-0.8
564,717	-	sbcB	HEPCGN_03270	0.88	+2.0
564,737	+	sbcB	HEPCGN_03270	0.90	+0.1
564,858	+				-0.6
564,858	+				+0.7
564,949	+				-0.1
565,044	-				-0.0
565,047	+				+0.2
565,048	-				+0.5
565,048	-				-0.5
565,111	+				+0.2
565,223	+	dacD	HEPCGN_03275	0.11	-1.5
565,223	+	dacD	HEPCGN_03275	0.11	+0.1
565,304	+	dacD	HEPCGN_03275	0.18	-0.4
565,304	+	dacD	HEPCGN_03275	0.18	+2.1
565,388	-	dacD	HEPCGN_03275	0.25	-0.2
565,511	+	dacD	HEPCGN_03275	0.36	-0.6
565,511	+	dacD	HEPCGN_03275	0.36	-0.9
565,514	-	dacD	HEPCGN_03275	0.36	+0.0
565,514	-	dacD	HEPCGN_03275	0.36	+0.5
565,644	+	dacD	HEPCGN_03275	0.47	+0.2
565,693	+	dacD	HEPCGN_03275	0.51	-0.5
565,697	+	dacD	HEPCGN_03275	0.52	-0.2
565,697	+	dacD	HEPCGN_03275	0.52	-0.0
565,697	+	dacD	HEPCGN_03275	0.52	-0.3
565,698	-	dacD	HEPCGN_03275	0.52	+0.2
565,698	-	dacD	HEPCGN_03275	0.52	-0.3
565,799	-	dacD	HEPCGN_03275	0.60	-0.7
565,799	-	dacD	HEPCGN_03275	0.60	-1.5