Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HEPCGN_03675 and HEPCGN_03680 are separated by 40 nucleotides HEPCGN_03680 and HEPCGN_03685 are separated by 252 nucleotides HEPCGN_03685 and HEPCGN_03690 are separated by 314 nucleotides HEPCGN_03690 and HEPCGN_03695 are separated by 12 nucleotides
HEPCGN_03675: HEPCGN_03675 - Ybl78, at 653,018 to 653,983
_03675
HEPCGN_03680: HEPCGN_03680 - DUF977 domain-containing protein, at 654,024 to 654,446
_03680
HEPCGN_03685: HEPCGN_03685 - SMEK domain-containing protein, at 654,699 to 655,598
_03685
HEPCGN_03690: HEPCGN_03690 - Tellurite resistance protein TehB, at 655,913 to 656,566
_03690
HEPCGN_03695: HEPCGN_03695 - Uncharacterized protein YmfE, at 656,579 to 657,274
_03695
Position (kb) 654
655
656 Strain fitness (log2 ratio) -2
-1
0
1 at 654.191 kb on - strand, within HEPCGN_03680 at 654.309 kb on - strand, within HEPCGN_03680 at 654.334 kb on + strand, within HEPCGN_03680 at 654.461 kb on - strand at 654.496 kb on - strand at 654.506 kb on + strand at 654.507 kb on - strand at 654.695 kb on - strand at 655.289 kb on + strand, within HEPCGN_03685 at 655.411 kb on + strand, within HEPCGN_03685 at 655.411 kb on + strand, within HEPCGN_03685 at 655.481 kb on + strand, within HEPCGN_03685 at 655.718 kb on + strand at 655.721 kb on + strand at 655.722 kb on - strand at 655.725 kb on + strand at 655.739 kb on - strand at 655.743 kb on + strand at 655.764 kb on - strand at 656.006 kb on - strand, within HEPCGN_03690 at 656.037 kb on + strand, within HEPCGN_03690
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 654,191 - HEPCGN_03680 0.39 -0.2 654,309 - HEPCGN_03680 0.67 -0.9 654,334 + HEPCGN_03680 0.73 -0.9 654,461 - +0.1 654,496 - -0.0 654,506 + -0.7 654,507 - -2.3 654,695 - -1.1 655,289 + HEPCGN_03685 0.66 -0.7 655,411 + HEPCGN_03685 0.79 -0.3 655,411 + HEPCGN_03685 0.79 -0.2 655,481 + HEPCGN_03685 0.87 -1.9 655,718 + -0.9 655,721 + -0.2 655,722 - +0.4 655,725 + +0.2 655,739 - -1.5 655,743 + -0.0 655,764 - -1.2 656,006 - HEPCGN_03690 0.14 -1.0 656,037 + HEPCGN_03690 0.19 -1.0
Or see this region's nucleotide sequence