Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06145

Experiment: TP15

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP15
1,101,978	+	dmsD	HEPCGN_06135	0.89	-0.4
1,102,049	+				+1.1
1,102,172	+				+0.1
1,102,173	-				+0.4
1,102,238	+	ynfH	HEPCGN_06140	0.18	-0.1
1,102,250	+	ynfH	HEPCGN_06140	0.19	-0.3
1,102,256	+	ynfH	HEPCGN_06140	0.20	-0.6
1,102,256	+	ynfH	HEPCGN_06140	0.20	+0.5
1,102,292	+	ynfH	HEPCGN_06140	0.24	+0.2
1,102,292	+	ynfH	HEPCGN_06140	0.24	-0.1
1,102,313	+	ynfH	HEPCGN_06140	0.26	+0.8
1,102,314	-	ynfH	HEPCGN_06140	0.26	+0.4
1,102,415	-	ynfH	HEPCGN_06140	0.38	+1.2
1,102,415	-	ynfH	HEPCGN_06140	0.38	-0.3
1,102,415	-	ynfH	HEPCGN_06140	0.38	+1.6
1,102,455	-	ynfH	HEPCGN_06140	0.43	-0.2
1,102,472	+	ynfH	HEPCGN_06140	0.45	+0.7
1,102,473	-	ynfH	HEPCGN_06140	0.45	+0.3
1,102,473	-	ynfH	HEPCGN_06140	0.45	-0.0
1,102,495	+	ynfH	HEPCGN_06140	0.48	+0.2
1,102,500	+	ynfH	HEPCGN_06140	0.48	-0.2
1,102,647	-	ynfH	HEPCGN_06140	0.65	-0.8
1,102,817	-	ynfH	HEPCGN_06140	0.85	-0.8
1,102,880	+				+0.2
1,102,884	-				+0.0
1,102,884	-				+1.1
1,102,945	+				+0.1
1,103,142	+	dmsB	HEPCGN_06145	0.33	+0.8
1,103,142	+	dmsB	HEPCGN_06145	0.33	+1.2
1,103,142	+	dmsB	HEPCGN_06145	0.33	-1.1
1,103,142	+	dmsB	HEPCGN_06145	0.33	-0.4
1,103,143	-	dmsB	HEPCGN_06145	0.33	+0.8
1,103,143	-	dmsB	HEPCGN_06145	0.33	+0.2
1,103,215	+	dmsB	HEPCGN_06145	0.45	-1.2
1,103,215	+	dmsB	HEPCGN_06145	0.45	+0.3
1,103,216	-	dmsB	HEPCGN_06145	0.46	+0.0
1,103,216	-	dmsB	HEPCGN_06145	0.46	+1.0
1,103,307	-	dmsB	HEPCGN_06145	0.61	-0.7
1,103,378	-	dmsB	HEPCGN_06145	0.73	+0.6
1,103,380	+	dmsB	HEPCGN_06145	0.73	+0.7
1,103,423	-	dmsB	HEPCGN_06145	0.80	+0.1
1,103,499	-				-0.6
1,103,545	+				+0.1
1,103,552	+				-0.5
1,103,553	-				+0.4
1,103,573	-				+0.7
1,103,770	+				-0.6
1,103,854	+	bisC	HEPCGN_06150	0.13	+0.8
1,103,855	-	bisC	HEPCGN_06150	0.13	+0.5
1,103,865	+	bisC	HEPCGN_06150	0.13	+0.7
1,103,887	-	bisC	HEPCGN_06150	0.14	+0.3
1,103,897	+	bisC	HEPCGN_06150	0.14	+0.5
1,103,968	-	bisC	HEPCGN_06150	0.17	+0.0
1,103,969	+	bisC	HEPCGN_06150	0.17	+1.1
1,103,970	-	bisC	HEPCGN_06150	0.17	-0.1
1,103,988	+	bisC	HEPCGN_06150	0.18	-1.7
1,104,309	-	bisC	HEPCGN_06150	0.32	+1.2
1,104,362	+	bisC	HEPCGN_06150	0.34	-0.0
1,104,393	+	bisC	HEPCGN_06150	0.35	+1.2
1,104,394	-	bisC	HEPCGN_06150	0.35	+0.0
1,104,443	+	bisC	HEPCGN_06150	0.37	-0.9
1,104,443	+	bisC	HEPCGN_06150	0.37	-0.8