Strain Fitness in Escherichia coli ECOR38 around HEPCGN_19765

Experiment: Bas67

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas67
2,705,328	+	hypA	HEPCGN_19755	0.48	-0.2
2,705,329	-	hypA	HEPCGN_19755	0.49	-0.6
2,705,726	-				-0.6
2,705,736	+				-0.4
2,705,737	-				+0.1
2,705,798	+	hycA	HEPCGN_19760	0.17	+0.7
2,705,912	+	hycA	HEPCGN_19760	0.42	-1.4
2,705,913	-	hycA	HEPCGN_19760	0.42	-0.4
2,705,957	+	hycA	HEPCGN_19760	0.51	-0.3
2,706,074	+	hycA	HEPCGN_19760	0.77	+0.9
2,706,075	-	hycA	HEPCGN_19760	0.77	-0.8
2,706,108	+	hycA	HEPCGN_19760	0.84	-1.1
2,706,108	+	hycA	HEPCGN_19760	0.84	-0.6
2,706,108	+	hycA	HEPCGN_19760	0.84	-0.7
2,706,108	+	hycA	HEPCGN_19760	0.84	-0.4
2,706,108	+	hycA	HEPCGN_19760	0.84	-0.4
2,706,109	-	hycA	HEPCGN_19760	0.84	+1.6
2,706,109	-	hycA	HEPCGN_19760	0.84	-0.4
2,706,109	-	hycA	HEPCGN_19760	0.84	-0.1
2,706,109	-	hycA	HEPCGN_19760	0.84	+1.6
2,706,109	-	hycA	HEPCGN_19760	0.84	+1.4
2,706,111	-	hycA	HEPCGN_19760	0.85	-0.3
2,706,112	+	hycA	HEPCGN_19760	0.85	-1.4
2,706,156	+				-1.0
2,706,554	-	hycB	HEPCGN_19765	0.41	-0.5
2,706,554	-	hycB	HEPCGN_19765	0.41	-2.2
2,706,710	+	hycB	HEPCGN_19765	0.66	-2.2
2,706,839	+	hycB	HEPCGN_19765	0.87	-0.2
2,706,839	+	hycB	HEPCGN_19765	0.87	-0.2
2,706,857	+				+0.3
2,706,857	+				-0.3
2,706,911	+				+1.7
2,706,912	-				-0.4
2,707,047	-				+0.3
2,707,119	-	hycC	HEPCGN_19770	0.11	-0.2
2,707,159	+	hycC	HEPCGN_19770	0.13	-0.6
2,707,159	+	hycC	HEPCGN_19770	0.13	-0.3
2,707,194	-	hycC	HEPCGN_19770	0.15	+0.2
2,707,249	+	hycC	HEPCGN_19770	0.18	-0.7
2,707,250	-	hycC	HEPCGN_19770	0.18	-0.9
2,707,250	-	hycC	HEPCGN_19770	0.18	+1.0
2,707,308	+	hycC	HEPCGN_19770	0.22	-1.0
2,707,474	+	hycC	HEPCGN_19770	0.31	-0.9
2,707,620	+	hycC	HEPCGN_19770	0.39	-0.8
2,707,651	-	hycC	HEPCGN_19770	0.40	-1.4
2,707,759	+	hycC	HEPCGN_19770	0.46	+2.6
2,707,759	+	hycC	HEPCGN_19770	0.46	-0.3
2,707,759	+	hycC	HEPCGN_19770	0.46	+0.0
2,707,759	+	hycC	HEPCGN_19770	0.46	+0.3
2,707,759	+	hycC	HEPCGN_19770	0.46	-1.3
2,707,910	-	hycC	HEPCGN_19770	0.55	-0.7