Strain Fitness in Escherichia coli ECOR38 around HEPCGN_04925

Experiment: Bas67

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas67
858,800	+	manZ	HEPCGN_04915	0.87	+0.0
858,800	+	manZ	HEPCGN_04915	0.87	-0.1
858,833	+				+0.0
858,887	+				+0.8
858,899	+				+2.1
858,900	-				+0.5
858,923	-				+0.6
858,989	-				+0.1
859,010	-	manY	HEPCGN_04920	0.11	+0.0
859,022	+	manY	HEPCGN_04920	0.13	+0.8
859,023	-	manY	HEPCGN_04920	0.13	+0.1
859,078	-	manY	HEPCGN_04920	0.20	+0.3
859,376	+	manY	HEPCGN_04920	0.57	+0.8
859,377	-	manY	HEPCGN_04920	0.57	-1.2
859,379	+	manY	HEPCGN_04920	0.57	+0.4
859,476	-	manY	HEPCGN_04920	0.69	+0.2
859,559	+	manY	HEPCGN_04920	0.80	-0.5
859,571	+	manY	HEPCGN_04920	0.81	-0.2
859,572	-	manY	HEPCGN_04920	0.81	-0.8
859,689	+				-1.5
859,690	-				-0.7
859,690	-				-0.7
859,738	-				+0.5
859,749	-				-0.5
859,780	+				+0.2
859,780	+				+0.1
859,786	-				+0.4
859,894	+	manX	HEPCGN_04925	0.11	-1.0
860,007	-	manX	HEPCGN_04925	0.23	-0.1
860,097	-	manX	HEPCGN_04925	0.32	-3.6
860,097	-	manX	HEPCGN_04925	0.32	-1.0
860,399	+	manX	HEPCGN_04925	0.63	-0.7
860,554	+	manX	HEPCGN_04925	0.79	+0.4
860,736	-				+0.4
860,743	+				-0.7
860,744	-				-0.1
860,761	-				+0.6
860,769	+				+0.2
860,773	-				+0.5
860,773	-				+1.3
860,958	+				+0.4
861,020	+				+0.9
861,053	+				-0.8
861,110	+				+1.5
861,133	+				+0.3
861,164	+				-1.1
861,191	+				-0.3
861,203	-				+0.2
861,446	-	yoaE	HEPCGN_04930	0.15	+0.1
861,485	-	yoaE	HEPCGN_04930	0.17	+0.7
861,485	-	yoaE	HEPCGN_04930	0.17	+0.7
861,652	+	yoaE	HEPCGN_04930	0.28	-1.1