Strain Fitness in Escherichia coli ECOR38 around HEPCGN_10385

Experiment: TP12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP12
819,470	+	ulaA	HEPCGN_10380	0.56	+0.3
819,546	+	ulaA	HEPCGN_10380	0.62	-0.2
819,547	-	ulaA	HEPCGN_10380	0.62	-1.2
819,548	+	ulaA	HEPCGN_10380	0.62	+1.0
819,548	+	ulaA	HEPCGN_10380	0.62	-0.1
819,549	-	ulaA	HEPCGN_10380	0.62	-0.7
819,549	-	ulaA	HEPCGN_10380	0.62	-1.5
819,549	-	ulaA	HEPCGN_10380	0.62	-0.4
819,549	-	ulaA	HEPCGN_10380	0.62	-0.2
819,696	+	ulaA	HEPCGN_10380	0.72	+1.0
819,728	+	ulaA	HEPCGN_10380	0.75	+0.9
819,729	-	ulaA	HEPCGN_10380	0.75	+2.3
819,729	-	ulaA	HEPCGN_10380	0.75	-1.1
819,777	+	ulaA	HEPCGN_10380	0.78	-0.9
819,778	-	ulaA	HEPCGN_10380	0.78	-0.6
819,961	-				+0.7
820,056	+				-0.5
820,067	+				-0.0
820,103	-				-0.6
820,440	+				+0.4
820,497	+				+0.9
820,563	-	ulaG	HEPCGN_10385	0.12	+0.4
820,851	-	ulaG	HEPCGN_10385	0.39	-0.7
820,990	-	ulaG	HEPCGN_10385	0.52	-0.4
821,063	+	ulaG	HEPCGN_10385	0.59	-0.6
821,063	+	ulaG	HEPCGN_10385	0.59	-1.2
821,125	-	ulaG	HEPCGN_10385	0.65	-0.2
821,125	-	ulaG	HEPCGN_10385	0.65	+0.3
821,128	+	ulaG	HEPCGN_10385	0.65	+0.6
821,129	-	ulaG	HEPCGN_10385	0.65	-1.4
821,129	-	ulaG	HEPCGN_10385	0.65	-1.3
821,129	-	ulaG	HEPCGN_10385	0.65	-0.5
821,129	-	ulaG	HEPCGN_10385	0.65	-1.8
821,179	+	ulaG	HEPCGN_10385	0.70	+0.9
821,203	-	ulaG	HEPCGN_10385	0.72	+0.7
821,356	+	ulaG	HEPCGN_10385	0.86	-2.0
821,374	-	ulaG	HEPCGN_10385	0.88	+0.3
821,463	+				+0.5
821,497	+				-2.4
821,528	+				-1.8
821,547	+				+1.0
821,550	+				+0.6
821,570	+				-0.1
821,729	+	ulaR	HEPCGN_10390	0.16	-1.0
821,780	+	ulaR	HEPCGN_10390	0.23	-1.9
821,781	-	ulaR	HEPCGN_10390	0.23	-0.8
821,781	-	ulaR	HEPCGN_10390	0.23	-0.7
821,781	-	ulaR	HEPCGN_10390	0.23	+0.6
821,852	+	ulaR	HEPCGN_10390	0.32	+0.1
821,859	-	ulaR	HEPCGN_10390	0.33	+1.2
821,969	+	ulaR	HEPCGN_10390	0.48	+0.4
821,969	+	ulaR	HEPCGN_10390	0.48	+0.2
821,969	+	ulaR	HEPCGN_10390	0.48	-0.5
821,970	-	ulaR	HEPCGN_10390	0.48	-0.5
821,970	-	ulaR	HEPCGN_10390	0.48	-2.6
821,991	+	ulaR	HEPCGN_10390	0.51	-2.4
821,991	+	ulaR	HEPCGN_10390	0.51	+0.1
822,040	-	ulaR	HEPCGN_10390	0.57	-0.2
822,040	-	ulaR	HEPCGN_10390	0.57	-1.3
822,093	+	ulaR	HEPCGN_10390	0.64	+0.1
822,094	-	ulaR	HEPCGN_10390	0.64	-0.8
822,094	-	ulaR	HEPCGN_10390	0.64	-1.3
822,147	+	ulaR	HEPCGN_10390	0.71	+0.2
822,149	+	ulaR	HEPCGN_10390	0.72	-2.4
822,158	+	ulaR	HEPCGN_10390	0.73	-2.4
822,159	-	ulaR	HEPCGN_10390	0.73	+0.8
822,225	-	ulaR	HEPCGN_10390	0.82	-1.7
822,230	+	ulaR	HEPCGN_10390	0.82	+0.6
822,395	+				-0.8
822,396	-				-0.1
822,396	-				-1.8
822,396	-				+0.6
822,454	+	yjfP	HEPCGN_10395	0.13	+0.3