Experiment: JK38
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt entE and entB are separated by 13 nucleotides entB and entA overlap by 1 nucleotides entA and entH are separated by 2 nucleotides entH and cstA are separated by 180 nucleotides
HEPCGN_00710: entE - (2,3-dihydroxybenzoyl)adenylate synthase EntE, at 71,195 to 72,805
entE
HEPCGN_00715: entB - enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB, at 72,819 to 73,676
entB
HEPCGN_00720: entA - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase EntA, at 73,676 to 74,422
entA
HEPCGN_00725: entH - proofreading thioesterase EntH, at 74,425 to 74,838
entH
HEPCGN_00730: cstA - pyruvate/proton symporter CstA, at 75,019 to 77,124
cstA
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1
2 at 72.836 kb on - strand at 72.844 kb on - strand at 72.867 kb on - strand at 73.044 kb on + strand, within entB at 73.097 kb on + strand, within entB at 73.097 kb on + strand, within entB at 73.097 kb on + strand, within entB at 73.194 kb on + strand, within entB at 73.260 kb on - strand, within entB at 73.270 kb on + strand, within entB at 73.272 kb on + strand, within entB at 73.273 kb on - strand, within entB at 73.289 kb on + strand, within entB at 73.289 kb on + strand, within entB at 73.290 kb on - strand, within entB at 73.290 kb on - strand, within entB at 73.314 kb on - strand, within entB at 73.392 kb on + strand, within entB at 73.392 kb on + strand, within entB at 73.392 kb on + strand, within entB at 73.393 kb on - strand, within entB at 73.393 kb on - strand, within entB at 73.449 kb on - strand, within entB at 73.674 kb on + strand at 73.724 kb on - strand at 73.725 kb on + strand at 73.725 kb on + strand at 73.726 kb on - strand at 73.726 kb on - strand at 73.730 kb on + strand at 73.861 kb on - strand, within entA at 73.861 kb on - strand, within entA at 73.952 kb on - strand, within entA at 74.057 kb on - strand, within entA at 74.182 kb on + strand, within entA at 74.372 kb on - strand at 74.408 kb on - strand at 74.421 kb on - strand at 74.421 kb on - strand at 74.506 kb on + strand, within entH at 74.506 kb on + strand, within entH at 74.506 kb on + strand, within entH at 74.506 kb on + strand, within entH at 74.507 kb on - strand, within entH at 74.507 kb on - strand, within entH at 74.559 kb on + strand, within entH at 74.851 kb on + strand at 74.908 kb on + strand at 74.970 kb on - strand at 74.972 kb on - strand at 75.019 kb on - strand at 75.063 kb on - strand at 75.096 kb on - strand at 75.147 kb on + strand at 75.147 kb on + strand at 75.148 kb on - strand at 75.148 kb on - strand at 75.148 kb on - strand at 75.148 kb on - strand at 75.181 kb on + strand at 75.182 kb on - strand at 75.182 kb on - strand at 75.256 kb on + strand, within cstA
Per-strain Table
Position Strand Gene LocusTag Fraction JK38 remove 72,836 - +0.3 72,844 - +1.3 72,867 - +0.6 73,044 + entB HEPCGN_00715 0.26 +0.3 73,097 + entB HEPCGN_00715 0.32 -0.4 73,097 + entB HEPCGN_00715 0.32 -0.5 73,097 + entB HEPCGN_00715 0.32 -0.3 73,194 + entB HEPCGN_00715 0.44 +0.4 73,260 - entB HEPCGN_00715 0.51 +0.3 73,270 + entB HEPCGN_00715 0.53 +0.3 73,272 + entB HEPCGN_00715 0.53 +0.2 73,273 - entB HEPCGN_00715 0.53 -0.0 73,289 + entB HEPCGN_00715 0.55 +0.2 73,289 + entB HEPCGN_00715 0.55 -1.8 73,290 - entB HEPCGN_00715 0.55 +0.9 73,290 - entB HEPCGN_00715 0.55 +0.1 73,314 - entB HEPCGN_00715 0.58 -1.1 73,392 + entB HEPCGN_00715 0.67 -0.6 73,392 + entB HEPCGN_00715 0.67 +0.0 73,392 + entB HEPCGN_00715 0.67 -0.0 73,393 - entB HEPCGN_00715 0.67 -0.2 73,393 - entB HEPCGN_00715 0.67 -1.2 73,449 - entB HEPCGN_00715 0.73 +0.0 73,674 + -0.1 73,724 - +0.3 73,725 + +1.1 73,725 + -0.0 73,726 - +0.5 73,726 - -0.1 73,730 + -0.0 73,861 - entA HEPCGN_00720 0.25 +0.5 73,861 - entA HEPCGN_00720 0.25 -0.3 73,952 - entA HEPCGN_00720 0.37 +2.1 74,057 - entA HEPCGN_00720 0.51 +0.3 74,182 + entA HEPCGN_00720 0.68 +0.4 74,372 - +0.0 74,408 - -0.9 74,421 - +0.8 74,421 - +0.3 74,506 + entH HEPCGN_00725 0.20 +0.7 74,506 + entH HEPCGN_00725 0.20 +0.5 74,506 + entH HEPCGN_00725 0.20 +0.4 74,506 + entH HEPCGN_00725 0.20 +0.0 74,507 - entH HEPCGN_00725 0.20 -0.4 74,507 - entH HEPCGN_00725 0.20 +0.3 74,559 + entH HEPCGN_00725 0.32 +0.2 74,851 + -0.8 74,908 + +1.2 74,970 - +0.4 74,972 - -0.8 75,019 - -0.3 75,063 - +0.7 75,096 - -0.2 75,147 + -0.4 75,147 + -1.5 75,148 - +0.9 75,148 - +0.4 75,148 - +0.3 75,148 - -0.2 75,181 + -1.0 75,182 - -2.5 75,182 - -0.3 75,256 + cstA HEPCGN_00730 0.11 +0.7
Or see this region's nucleotide sequence