Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03105

Experiment: Phage Lil 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Lil 3
3,230,862	-		OHPLBJKB_03103	0.72	+1.2
3,230,895	+		OHPLBJKB_03103	0.74	+0.1
3,230,895	+		OHPLBJKB_03103	0.74	+0.5
3,230,895	+		OHPLBJKB_03103	0.74	+0.5
3,230,896	-		OHPLBJKB_03103	0.74	-2.4
3,230,909	+		OHPLBJKB_03103	0.75	+0.3
3,230,909	+		OHPLBJKB_03103	0.75	-0.6
3,230,910	-		OHPLBJKB_03103	0.76	-0.2
3,230,910	-		OHPLBJKB_03103	0.76	+0.5
3,230,916	+		OHPLBJKB_03103	0.76	-0.1
3,230,916	+		OHPLBJKB_03103	0.76	+0.0
3,230,930	-		OHPLBJKB_03103	0.77	-1.7
3,231,081	+		OHPLBJKB_03103	0.90	+0.6
3,231,082	-		OHPLBJKB_03103	0.90	-1.4
3,231,096	-				-1.4
3,231,140	+				-0.6
3,231,140	+				-2.1
3,231,140	+				-0.6
3,231,140	+				+0.9
3,231,141	-				-0.6
3,231,141	-				-1.2
3,231,149	+				+0.5
3,231,150	-				+1.4
3,231,150	-				-0.6
3,231,150	-				+1.4
3,231,150	-				+0.9
3,231,150	-				+2.2
3,231,162	+				+0.7
3,231,190	-				+1.1
3,231,193	-				-0.3
3,231,193	-				-0.0
3,231,298	-		OHPLBJKB_03104	0.19	-1.2
3,231,354	+		OHPLBJKB_03104	0.27	+0.3
3,231,354	+		OHPLBJKB_03104	0.27	-0.9
3,231,354	+		OHPLBJKB_03104	0.27	-1.6
3,231,354	+		OHPLBJKB_03104	0.27	+2.0
3,231,355	-		OHPLBJKB_03104	0.28	+0.4
3,231,355	-		OHPLBJKB_03104	0.28	+1.4
3,231,355	-		OHPLBJKB_03104	0.28	+0.1
3,231,368	-		OHPLBJKB_03104	0.30	-0.5
3,231,425	+		OHPLBJKB_03104	0.39	+0.9
3,231,426	-		OHPLBJKB_03104	0.39	+1.2
3,231,426	-		OHPLBJKB_03104	0.39	-1.5
3,231,460	-		OHPLBJKB_03104	0.44	+0.4
3,231,460	-		OHPLBJKB_03104	0.44	-0.6
3,231,537	-		OHPLBJKB_03104	0.57	+1.1
3,231,542	+		OHPLBJKB_03104	0.57	+0.2
3,231,550	+		OHPLBJKB_03104	0.59	+1.7
3,231,582	+		OHPLBJKB_03104	0.64	+0.2
3,231,603	+		OHPLBJKB_03104	0.67	+1.5
3,231,613	-		OHPLBJKB_03104	0.69	+1.1
3,231,694	-		OHPLBJKB_03104	0.81	-0.6
3,231,784	+				-0.6
3,231,785	-				-0.2
3,231,808	+				-2.2
3,231,808	+				+0.2
3,231,808	+				-0.2
3,231,808	+				+0.1
3,231,808	+				+0.1
3,231,808	+				-0.1
3,231,885	+				-0.1
3,231,995	+		OHPLBJKB_03105	0.16	+0.3
3,231,996	-		OHPLBJKB_03105	0.16	+1.4
3,232,013	+		OHPLBJKB_03105	0.17	-0.8
3,232,013	+		OHPLBJKB_03105	0.17	-2.0
3,232,014	-		OHPLBJKB_03105	0.17	+0.5
3,232,014	-		OHPLBJKB_03105	0.17	-0.5
3,232,014	-		OHPLBJKB_03105	0.17	+0.1
3,232,018	-		OHPLBJKB_03105	0.18	+1.7
3,232,018	-		OHPLBJKB_03105	0.18	-1.2
3,232,018	-		OHPLBJKB_03105	0.18	-1.4
3,232,018	-		OHPLBJKB_03105	0.18	+0.6
3,232,054	+		OHPLBJKB_03105	0.21	-0.5
3,232,109	+		OHPLBJKB_03105	0.26	+1.7
3,232,130	-		OHPLBJKB_03105	0.27	+0.0
3,232,130	-		OHPLBJKB_03105	0.27	+0.0
3,232,130	-		OHPLBJKB_03105	0.27	+0.5
3,232,130	-		OHPLBJKB_03105	0.27	+0.5
3,232,130	-		OHPLBJKB_03105	0.27	+1.1
3,232,130	-		OHPLBJKB_03105	0.27	+0.2
3,232,134	+		OHPLBJKB_03105	0.28	+0.1
3,232,181	+		OHPLBJKB_03105	0.32	+0.6
3,232,182	-		OHPLBJKB_03105	0.32	+0.0
3,232,182	-		OHPLBJKB_03105	0.32	-1.1
3,232,189	+		OHPLBJKB_03105	0.33	+0.2
3,232,189	+		OHPLBJKB_03105	0.33	-0.2
3,232,190	-		OHPLBJKB_03105	0.33	-1.1
3,232,190	-		OHPLBJKB_03105	0.33	-2.4
3,232,190	-		OHPLBJKB_03105	0.33	+0.1
3,232,254	+		OHPLBJKB_03105	0.38	+0.3
3,232,254	+		OHPLBJKB_03105	0.38	+0.2
3,232,254	+		OHPLBJKB_03105	0.38	-0.7
3,232,255	-		OHPLBJKB_03105	0.38	-0.4
3,232,255	-		OHPLBJKB_03105	0.38	+0.1
3,232,260	-		OHPLBJKB_03105	0.39	-1.0
3,232,371	+		OHPLBJKB_03105	0.48	+1.2
3,232,492	+		OHPLBJKB_03105	0.59	+0.7
3,232,496	-		OHPLBJKB_03105	0.59	-0.5
3,232,549	-		OHPLBJKB_03105	0.64	-0.1
3,232,599	-		OHPLBJKB_03105	0.68	-0.0
3,232,658	+		OHPLBJKB_03105	0.73	-0.5
3,232,659	-		OHPLBJKB_03105	0.73	+0.4
3,232,660	+		OHPLBJKB_03105	0.73	+0.1
3,232,722	-		OHPLBJKB_03105	0.78	-1.1
3,232,785	-		OHPLBJKB_03105	0.84	+1.4
3,232,785	-		OHPLBJKB_03105	0.84	-0.6
3,232,828	+		OHPLBJKB_03105	0.88	+0.3
3,232,829	-		OHPLBJKB_03105	0.88	+1.1
3,232,833	-		OHPLBJKB_03105	0.88	-1.1
3,232,873	-				+0.5
3,232,918	-				+0.0
3,232,962	+				-0.1
3,232,963	-				-1.7
3,232,980	+				-0.3
3,233,009	+				-0.1
3,233,009	+				-1.8
3,233,010	-				+1.5
3,233,012	-				-1.9
3,233,065	+				+1.5
3,233,122	+				-0.4
3,233,123	-				-0.9
3,233,272	-		OHPLBJKB_03106	0.18	+0.4
3,233,306	+		OHPLBJKB_03106	0.21	+0.5
3,233,306	+		OHPLBJKB_03106	0.21	-0.8
3,233,306	+		OHPLBJKB_03106	0.21	-0.6
3,233,306	+		OHPLBJKB_03106	0.21	-0.5
3,233,306	+		OHPLBJKB_03106	0.21	-1.8
3,233,307	-		OHPLBJKB_03106	0.21	+0.6
3,233,307	-		OHPLBJKB_03106	0.21	-0.0
3,233,476	+		OHPLBJKB_03106	0.36	+0.9
3,233,477	-		OHPLBJKB_03106	0.36	-0.3
3,233,477	-		OHPLBJKB_03106	0.36	-1.3
3,233,477	-		OHPLBJKB_03106	0.36	-0.8
3,233,478	+		OHPLBJKB_03106	0.37	+0.9
3,233,478	+		OHPLBJKB_03106	0.37	+1.6
3,233,529	+		OHPLBJKB_03106	0.41	-0.1
3,233,576	-		OHPLBJKB_03106	0.46	-1.6
3,233,576	-		OHPLBJKB_03106	0.46	+0.2
3,233,576	-		OHPLBJKB_03106	0.46	+0.4
3,233,576	-		OHPLBJKB_03106	0.46	-0.4
3,233,754	-		OHPLBJKB_03106	0.62	+0.3
3,233,784	+		OHPLBJKB_03106	0.65	-0.8
3,233,785	-		OHPLBJKB_03106	0.65	+1.2
3,233,785	-		OHPLBJKB_03106	0.65	+0.3
3,233,785	-		OHPLBJKB_03106	0.65	+1.3
3,233,787	+		OHPLBJKB_03106	0.65	+2.2
3,233,787	+		OHPLBJKB_03106	0.65	-0.3
3,233,829	+		OHPLBJKB_03106	0.69	+0.6