Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03994

Experiment: Phage Ame 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Ame 3
4,190,591	+		OHPLBJKB_03992	0.58	+1.8
4,190,594	+		OHPLBJKB_03992	0.58	+0.2
4,190,594	+		OHPLBJKB_03992	0.58	+0.8
4,190,594	+		OHPLBJKB_03992	0.58	-1.7
4,190,594	+		OHPLBJKB_03992	0.58	+0.0
4,190,594	+		OHPLBJKB_03992	0.58	+0.9
4,190,595	-		OHPLBJKB_03992	0.58	-0.3
4,190,595	-		OHPLBJKB_03992	0.58	-0.2
4,190,595	-		OHPLBJKB_03992	0.58	+0.7
4,190,595	-		OHPLBJKB_03992	0.58	+0.2
4,190,598	+		OHPLBJKB_03992	0.58	+0.3
4,190,659	+		OHPLBJKB_03992	0.64	+0.8
4,190,665	-		OHPLBJKB_03992	0.65	+0.2
4,190,726	-		OHPLBJKB_03992	0.71	-0.5
4,190,773	+		OHPLBJKB_03992	0.76	+0.7
4,190,802	+		OHPLBJKB_03992	0.79	-1.8
4,190,802	+		OHPLBJKB_03992	0.79	+0.0
4,190,802	+		OHPLBJKB_03992	0.79	+1.6
4,190,802	+		OHPLBJKB_03992	0.79	+3.1
4,190,803	-		OHPLBJKB_03992	0.79	-0.2
4,190,803	-		OHPLBJKB_03992	0.79	+0.3
4,190,829	+		OHPLBJKB_03992	0.82	+0.5
4,190,829	+		OHPLBJKB_03992	0.82	-0.8
4,190,829	+		OHPLBJKB_03992	0.82	-0.8
4,190,829	+		OHPLBJKB_03992	0.82	-0.7
4,190,829	+		OHPLBJKB_03992	0.82	-0.5
4,190,830	-		OHPLBJKB_03992	0.82	+1.2
4,190,830	-		OHPLBJKB_03992	0.82	-0.2
4,191,049	-				-0.3
4,191,049	-				+1.1
4,191,060	-				-1.1
4,191,060	-				+0.1
4,191,060	-				-0.6
4,191,060	-				-2.3
4,191,060	-				-1.2
4,191,063	+				-0.3
4,191,063	+				-0.4
4,191,064	-				-2.8
4,191,064	-				-0.4
4,191,068	+				-2.0
4,191,069	-				+0.3
4,191,098	+				-1.6
4,191,125	-				-0.5
4,191,134	+				-0.3
4,191,134	+				-0.9
4,191,134	+				-0.1
4,191,148	+				-0.2
4,191,148	+				-0.2
4,191,148	+				-2.5
4,191,148	+				+1.8
4,191,149	-				-1.3
4,191,149	-				+0.6
4,191,149	-				-1.3
4,191,175	+				-0.4
4,191,202	+		OHPLBJKB_03993	0.12	-1.7
4,191,225	-		OHPLBJKB_03993	0.21	-0.5
4,191,233	+		OHPLBJKB_03993	0.24	+0.2
4,191,262	-		OHPLBJKB_03993	0.36	-0.7
4,191,281	+		OHPLBJKB_03993	0.44	+0.5
4,191,281	+		OHPLBJKB_03993	0.44	-1.6
4,191,281	+		OHPLBJKB_03993	0.44	+0.4
4,191,281	+		OHPLBJKB_03993	0.44	-2.0
4,191,281	+		OHPLBJKB_03993	0.44	-1.3
4,191,282	-		OHPLBJKB_03993	0.44	+0.6
4,191,282	-		OHPLBJKB_03993	0.44	+0.1
4,191,282	-		OHPLBJKB_03993	0.44	-1.3
4,191,314	+		OHPLBJKB_03993	0.58	-0.8
4,191,314	+		OHPLBJKB_03993	0.58	-0.3
4,191,315	-		OHPLBJKB_03993	0.58	-1.4
4,191,406	-				+0.9
4,191,453	-				-0.0
4,191,486	-				-0.3
4,191,595	-				+0.7
4,191,595	-				+1.0
4,191,612	+				+2.4
4,191,628	+				+0.5
4,191,629	-				+0.3
4,191,681	+		OHPLBJKB_03994	0.13	-1.0
4,191,681	+		OHPLBJKB_03994	0.13	+1.3
4,191,682	-		OHPLBJKB_03994	0.13	+0.3
4,191,682	-		OHPLBJKB_03994	0.13	+0.0
4,191,704	+		OHPLBJKB_03994	0.15	-0.1
4,191,705	-		OHPLBJKB_03994	0.15	-0.9
4,191,734	+		OHPLBJKB_03994	0.18	-0.3
4,191,734	+		OHPLBJKB_03994	0.18	+0.4
4,191,735	-		OHPLBJKB_03994	0.18	+1.7
4,191,735	-		OHPLBJKB_03994	0.18	-0.6
4,191,735	-		OHPLBJKB_03994	0.18	-2.8
4,191,740	+		OHPLBJKB_03994	0.18	-0.4
4,191,740	+		OHPLBJKB_03994	0.18	-0.0
4,191,741	-		OHPLBJKB_03994	0.18	-0.4
4,191,864	+		OHPLBJKB_03994	0.30	+0.5
4,191,864	+		OHPLBJKB_03994	0.30	-0.7
4,191,864	+		OHPLBJKB_03994	0.30	+1.3
4,191,864	+		OHPLBJKB_03994	0.30	-0.5
4,191,903	+		OHPLBJKB_03994	0.34	-0.3
4,191,903	+		OHPLBJKB_03994	0.34	+0.3
4,192,023	+		OHPLBJKB_03994	0.46	+0.0
4,192,098	-		OHPLBJKB_03994	0.53	+0.6
4,192,274	+		OHPLBJKB_03994	0.70	-2.1
4,192,274	+		OHPLBJKB_03994	0.70	+2.2
4,192,367	+		OHPLBJKB_03994	0.79	+0.0
4,192,367	+		OHPLBJKB_03994	0.79	+0.4
4,192,368	-		OHPLBJKB_03994	0.79	+0.2
4,192,368	-		OHPLBJKB_03994	0.79	+0.6
4,192,387	-		OHPLBJKB_03994	0.81	+1.6
4,192,395	+		OHPLBJKB_03994	0.81	+3.0
4,192,424	+		OHPLBJKB_03994	0.84	+0.2
4,192,434	+		OHPLBJKB_03994	0.85	-1.5
4,192,460	+		OHPLBJKB_03994	0.88	+0.4
4,192,461	-		OHPLBJKB_03994	0.88	+1.9
4,192,670	+				-0.8
4,192,671	-				-0.2
4,192,671	-				+0.1
4,192,673	+				+0.1
4,192,673	+				+0.3
4,192,673	+				+0.2
4,192,674	-				-0.4
4,192,674	-				-0.0
4,192,674	-				-0.4
4,192,674	-				-2.9
4,192,681	-				-0.5
4,192,852	-				+0.7
4,192,865	-				+0.2
4,192,913	-				+0.2
4,192,929	-				-1.3
4,193,135	+		OHPLBJKB_03995	0.26	+0.8
4,193,246	-		OHPLBJKB_03995	0.42	-0.4
4,193,270	-		OHPLBJKB_03995	0.45	-1.4
4,193,397	+		OHPLBJKB_03995	0.63	+0.7
4,193,397	+		OHPLBJKB_03995	0.63	+0.6
4,193,414	+		OHPLBJKB_03995	0.66	+0.5
4,193,483	+		OHPLBJKB_03995	0.75	+0.6
4,193,529	-		OHPLBJKB_03995	0.82	+0.1
4,193,548	-		OHPLBJKB_03995	0.84	+0.6