Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01403

Experiment: Phage Iri 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Iri 3
1,446,831	+		OHPLBJKB_01401	0.42	+1.9
1,446,853	+		OHPLBJKB_01401	0.45	+1.6
1,446,854	-		OHPLBJKB_01401	0.45	-0.2
1,446,985	+		OHPLBJKB_01401	0.59	+0.7
1,446,985	+		OHPLBJKB_01401	0.59	+0.2
1,446,985	+		OHPLBJKB_01401	0.59	-1.6
1,446,986	-		OHPLBJKB_01401	0.60	+0.6
1,446,986	-		OHPLBJKB_01401	0.60	-0.8
1,446,996	-		OHPLBJKB_01401	0.61	+1.4
1,446,996	-		OHPLBJKB_01401	0.61	-0.4
1,446,999	-		OHPLBJKB_01401	0.61	-2.1
1,447,207	+		OHPLBJKB_01401	0.84	+0.9
1,447,339	+				-0.9
1,447,339	+				+1.2
1,447,340	-				-1.1
1,447,340	-				-0.2
1,447,340	-				-0.4
1,447,340	-				-0.2
1,447,340	-				-1.6
1,447,383	+				+0.0
1,447,384	-				+0.4
1,447,384	-				-0.3
1,447,384	-				+0.4
1,447,427	+		OHPLBJKB_01402	0.16	+0.3
1,447,447	+		OHPLBJKB_01402	0.22	-1.6
1,447,447	+		OHPLBJKB_01402	0.22	-1.1
1,447,448	-		OHPLBJKB_01402	0.22	-0.3
1,447,448	-		OHPLBJKB_01402	0.22	-0.4
1,447,448	-		OHPLBJKB_01402	0.22	-1.4
1,447,448	-		OHPLBJKB_01402	0.22	+1.8
1,447,448	-		OHPLBJKB_01402	0.22	+0.6
1,447,448	-		OHPLBJKB_01402	0.22	-0.2
1,447,521	-		OHPLBJKB_01402	0.42	+1.1
1,447,527	+		OHPLBJKB_01402	0.44	+0.4
1,447,528	-		OHPLBJKB_01402	0.44	+0.2
1,447,580	+		OHPLBJKB_01402	0.58	-1.0
1,447,581	-		OHPLBJKB_01402	0.59	-1.3
1,447,668	-		OHPLBJKB_01402	0.83	+2.0
1,447,668	-		OHPLBJKB_01402	0.83	+0.7
1,447,703	+				+0.4
1,447,709	+				+0.2
1,447,712	+				+0.3
1,447,750	+				-1.6
1,447,751	-				-0.3
1,447,754	+				+0.9
1,447,754	+				+0.2
1,447,755	-				+0.0
1,447,764	+				-0.4
1,447,765	-				-1.0
1,447,767	+				-0.1
1,447,824	-				-2.2
1,447,824	-				-0.4
1,447,887	+		OHPLBJKB_01403	0.15	+0.0
1,447,895	+		OHPLBJKB_01403	0.17	-0.4
1,447,895	+		OHPLBJKB_01403	0.17	+0.9
1,447,895	+		OHPLBJKB_01403	0.17	+2.3
1,447,896	-		OHPLBJKB_01403	0.17	-0.1
1,447,896	-		OHPLBJKB_01403	0.17	+0.7
1,447,959	+		OHPLBJKB_01403	0.27	+0.7
1,447,959	+		OHPLBJKB_01403	0.27	-0.2
1,447,960	-		OHPLBJKB_01403	0.27	-0.1
1,447,960	-		OHPLBJKB_01403	0.27	-0.4
1,447,960	-		OHPLBJKB_01403	0.27	-1.3
1,448,006	+		OHPLBJKB_01403	0.34	+0.2
1,448,006	+		OHPLBJKB_01403	0.34	+0.6
1,448,007	-		OHPLBJKB_01403	0.34	-1.4
1,448,007	-		OHPLBJKB_01403	0.34	+0.4
1,448,007	-		OHPLBJKB_01403	0.34	-1.0
1,448,007	-		OHPLBJKB_01403	0.34	+0.6
1,448,007	-		OHPLBJKB_01403	0.34	+0.6
1,448,007	-		OHPLBJKB_01403	0.34	-1.0
1,448,052	+		OHPLBJKB_01403	0.41	+0.6
1,448,133	-		OHPLBJKB_01403	0.53	+0.4
1,448,141	+		OHPLBJKB_01403	0.55	-0.3
1,448,141	+		OHPLBJKB_01403	0.55	+0.3
1,448,142	-		OHPLBJKB_01403	0.55	+0.4
1,448,202	+		OHPLBJKB_01403	0.64	+1.0
1,448,202	+		OHPLBJKB_01403	0.64	+0.6
1,448,234	+		OHPLBJKB_01403	0.69	-0.6
1,448,342	+		OHPLBJKB_01403	0.86	-1.1
1,448,342	+		OHPLBJKB_01403	0.86	+0.5
1,448,343	-		OHPLBJKB_01403	0.86	-1.0
1,448,390	-				+1.0
1,448,390	-				+0.3
1,448,421	+				-0.5
1,448,473	-				-0.4
1,448,473	-				+2.2
1,448,473	-				-0.6
1,448,475	-				-0.1
1,448,491	+				-0.8
1,448,492	-				+0.0
1,448,500	-				+0.9
1,448,532	+				+0.0
1,448,533	-				+0.6
1,448,533	-				-0.5
1,448,568	+				+0.1
1,448,568	+				+0.0
1,448,568	+				-0.1
1,448,568	+				+1.6
1,448,621	+				-0.4
1,448,621	+				-1.6
1,448,621	+				-0.5
1,448,621	+				-0.2
1,448,621	+				+0.6
1,448,622	-				-1.1
1,448,622	-				-0.1
1,448,622	-				-0.8
1,448,622	-				+0.7
1,448,622	-				+0.6
1,448,672	-		OHPLBJKB_01404	0.16	+0.1
1,448,839	+		OHPLBJKB_01404	0.42	-0.6
1,448,839	+		OHPLBJKB_01404	0.42	+0.2
1,448,839	+		OHPLBJKB_01404	0.42	-1.3
1,448,839	+		OHPLBJKB_01404	0.42	+0.0
1,448,840	-		OHPLBJKB_01404	0.42	-0.9
1,448,840	-		OHPLBJKB_01404	0.42	+1.2
1,448,840	-		OHPLBJKB_01404	0.42	-0.9
1,448,840	-		OHPLBJKB_01404	0.42	-1.1
1,448,840	-		OHPLBJKB_01404	0.42	+0.7
1,449,027	+		OHPLBJKB_01404	0.71	+1.3
1,449,027	+		OHPLBJKB_01404	0.71	+0.2
1,449,027	+		OHPLBJKB_01404	0.71	-0.1
1,449,028	-		OHPLBJKB_01404	0.71	-0.2
1,449,028	-		OHPLBJKB_01404	0.71	-1.0
1,449,048	+		OHPLBJKB_01404	0.74	-0.5
1,449,073	+		OHPLBJKB_01404	0.78	+0.6
1,449,074	-		OHPLBJKB_01404	0.78	-2.1
1,449,074	-		OHPLBJKB_01404	0.78	-1.2
1,449,105	+		OHPLBJKB_01404	0.83	-0.8
1,449,106	-		OHPLBJKB_01404	0.83	-2.4
1,449,108	+		OHPLBJKB_01404	0.83	+0.4
1,449,108	+		OHPLBJKB_01404	0.83	-0.7
1,449,108	+		OHPLBJKB_01404	0.83	-1.1
1,449,109	-		OHPLBJKB_01404	0.84	-1.3
1,449,109	-		OHPLBJKB_01404	0.84	-0.2
1,449,184	+				+0.9
1,449,184	+				+0.6
1,449,239	+				-0.7
1,449,239	+				+0.7
1,449,239	+				-0.3
1,449,239	+				-0.9
1,449,240	-				+0.2
1,449,240	-				+2.0
1,449,240	-				+0.3
1,449,240	-				-0.4
1,449,240	-				-0.9
1,449,240	-				+0.3
1,449,240	-				-1.5
1,449,245	-				-2.5
1,449,398	+		OHPLBJKB_01405	0.23	-0.6