Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04325

Experiment: No phage

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04324 and OHPLBJKB_04325 are separated by 313 nucleotidesOHPLBJKB_04325 and OHPLBJKB_04326 are separated by 85 nucleotides OHPLBJKB_04324: OHPLBJKB_04324 - Glutamine--fructose-6-phosphate aminotransferase [isomerizing], at 4,545,152 to 4,546,981 _04324 OHPLBJKB_04325: OHPLBJKB_04325 - Phosphate-binding protein PstS, at 4,547,295 to 4,548,335 _04325 OHPLBJKB_04326: OHPLBJKB_04326 - Phosphate transport system permease protein PstC, at 4,548,421 to 4,549,380 _04326 Position (kb) 4547 4548 4549Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 4546.980 kb on - strandat 4546.982 kb on + strandat 4546.983 kb on - strandat 4547.129 kb on - strandat 4547.160 kb on - strandat 4547.182 kb on + strandat 4547.183 kb on - strandat 4547.206 kb on + strandat 4547.213 kb on + strandat 4547.214 kb on - strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.217 kb on + strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.218 kb on - strandat 4547.219 kb on + strandat 4547.219 kb on + strandat 4547.219 kb on + strandat 4547.220 kb on - strandat 4547.220 kb on - strandat 4547.220 kb on - strandat 4547.220 kb on - strandat 4547.220 kb on - strandat 4547.239 kb on + strandat 4547.272 kb on + strandat 4547.272 kb on + strandat 4547.294 kb on + strandat 4547.303 kb on + strandat 4547.304 kb on - strandat 4547.436 kb on + strand, within OHPLBJKB_04325at 4547.436 kb on + strand, within OHPLBJKB_04325at 4547.456 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.494 kb on + strand, within OHPLBJKB_04325at 4547.513 kb on + strand, within OHPLBJKB_04325at 4547.660 kb on + strand, within OHPLBJKB_04325at 4547.679 kb on + strand, within OHPLBJKB_04325at 4547.852 kb on + strand, within OHPLBJKB_04325at 4547.861 kb on + strand, within OHPLBJKB_04325at 4547.866 kb on + strand, within OHPLBJKB_04325at 4547.955 kb on + strand, within OHPLBJKB_04325at 4548.011 kb on + strand, within OHPLBJKB_04325at 4548.122 kb on + strand, within OHPLBJKB_04325at 4548.122 kb on + strand, within OHPLBJKB_04325at 4548.123 kb on - strand, within OHPLBJKB_04325at 4548.125 kb on + strand, within OHPLBJKB_04325at 4548.125 kb on + strand, within OHPLBJKB_04325at 4548.302 kb on + strandat 4548.305 kb on + strandat 4548.333 kb on + strandat 4548.404 kb on + strandat 4548.415 kb on + strandat 4548.420 kb on + strandat 4548.531 kb on + strand, within OHPLBJKB_04326at 4548.792 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4549.177 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.311 kb on + strandat 4549.311 kb on + strandat 4549.312 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No phage
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4,546,980 - -0.1
4,546,982 + +0.1
4,546,983 - +0.2
4,547,129 - +1.2
4,547,160 - +0.4
4,547,182 + -0.4
4,547,183 - +0.3
4,547,206 + -2.2
4,547,213 + -0.3
4,547,214 - -1.1
4,547,217 + +0.7
4,547,217 + +0.1
4,547,217 + -0.8
4,547,217 + -0.5
4,547,217 + -1.1
4,547,217 + +1.2
4,547,217 + +0.8
4,547,217 + +0.9
4,547,218 - -2.3
4,547,218 - -0.9
4,547,218 - -1.1
4,547,218 - -1.3
4,547,218 - -1.1
4,547,218 - -0.0
4,547,218 - -2.6
4,547,218 - -0.9
4,547,219 + -0.8
4,547,219 + +0.9
4,547,219 + -1.6
4,547,220 - -2.9
4,547,220 - -2.1
4,547,220 - -1.9
4,547,220 - -0.6
4,547,220 - -1.7
4,547,239 + -0.9
4,547,272 + -0.4
4,547,272 + -0.5
4,547,294 + -0.8
4,547,303 + -1.1
4,547,304 - +0.4
4,547,436 + OHPLBJKB_04325 0.14 -2.1
4,547,436 + OHPLBJKB_04325 0.14 -1.9
4,547,456 + OHPLBJKB_04325 0.15 -1.1
4,547,466 + OHPLBJKB_04325 0.16 -0.5
4,547,466 + OHPLBJKB_04325 0.16 -2.8
4,547,466 + OHPLBJKB_04325 0.16 -2.4
4,547,466 + OHPLBJKB_04325 0.16 -0.3
4,547,466 + OHPLBJKB_04325 0.16 -2.1
4,547,476 + OHPLBJKB_04325 0.17 -2.5
4,547,476 + OHPLBJKB_04325 0.17 -0.1
4,547,476 + OHPLBJKB_04325 0.17 -0.3
4,547,476 + OHPLBJKB_04325 0.17 -1.3
4,547,476 + OHPLBJKB_04325 0.17 -0.6
4,547,494 + OHPLBJKB_04325 0.19 -0.5
4,547,513 + OHPLBJKB_04325 0.21 +1.2
4,547,660 + OHPLBJKB_04325 0.35 -0.3
4,547,679 + OHPLBJKB_04325 0.37 -1.1
4,547,852 + OHPLBJKB_04325 0.54 -0.8
4,547,861 + OHPLBJKB_04325 0.54 +0.1
4,547,866 + OHPLBJKB_04325 0.55 -0.2
4,547,955 + OHPLBJKB_04325 0.63 -0.8
4,548,011 + OHPLBJKB_04325 0.69 -1.2
4,548,122 + OHPLBJKB_04325 0.79 -1.6
4,548,122 + OHPLBJKB_04325 0.79 -2.5
4,548,123 - OHPLBJKB_04325 0.80 +0.7
4,548,125 + OHPLBJKB_04325 0.80 -2.2
4,548,125 + OHPLBJKB_04325 0.80 +0.4
4,548,302 + +1.2
4,548,305 + -1.0
4,548,333 + +0.3
4,548,404 + -0.9
4,548,415 + -1.3
4,548,420 + +1.2
4,548,531 + OHPLBJKB_04326 0.11 -1.5
4,548,792 + OHPLBJKB_04326 0.39 -1.3
4,548,867 + OHPLBJKB_04326 0.46 -0.6
4,548,867 + OHPLBJKB_04326 0.46 -2.4
4,549,177 + OHPLBJKB_04326 0.79 +1.7
4,549,201 + OHPLBJKB_04326 0.81 -1.3
4,549,201 + OHPLBJKB_04326 0.81 +0.5
4,549,201 + OHPLBJKB_04326 0.81 -0.5
4,549,201 + OHPLBJKB_04326 0.81 -2.3
4,549,201 + OHPLBJKB_04326 0.81 -0.2
4,549,202 - OHPLBJKB_04326 0.81 +0.4
4,549,202 - OHPLBJKB_04326 0.81 +0.1
4,549,203 + OHPLBJKB_04326 0.81 -0.7
4,549,203 + OHPLBJKB_04326 0.81 -1.9
4,549,203 + OHPLBJKB_04326 0.81 +0.7
4,549,218 + OHPLBJKB_04326 0.83 -0.2
4,549,218 + OHPLBJKB_04326 0.83 -4.0
4,549,218 + OHPLBJKB_04326 0.83 +0.7
4,549,311 + +0.2
4,549,311 + +0.9
4,549,312 - -1.1

Or see this region's nucleotide sequence