Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02760

Experiment: No phage

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02759 and OHPLBJKB_02760 are separated by 168 nucleotidesOHPLBJKB_02760 and OHPLBJKB_02761 are separated by 70 nucleotides OHPLBJKB_02759: OHPLBJKB_02759 - putative metalloprotease YcaL, at 2,881,268 to 2,882,032 _02759 OHPLBJKB_02760: OHPLBJKB_02760 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,882,201 to 2,883,484 _02760 OHPLBJKB_02761: OHPLBJKB_02761 - Phosphoserine aminotransferase, at 2,883,555 to 2,884,643 _02761 Position (kb) 2882 2883 2884Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2881.215 kb on - strandat 2881.226 kb on - strandat 2881.226 kb on - strandat 2881.269 kb on + strandat 2881.270 kb on - strandat 2881.270 kb on - strandat 2881.270 kb on - strandat 2881.270 kb on - strandat 2881.273 kb on + strandat 2881.286 kb on - strandat 2881.460 kb on - strand, within OHPLBJKB_02759at 2881.470 kb on + strand, within OHPLBJKB_02759at 2881.471 kb on - strand, within OHPLBJKB_02759at 2881.474 kb on + strand, within OHPLBJKB_02759at 2881.474 kb on + strand, within OHPLBJKB_02759at 2881.475 kb on - strand, within OHPLBJKB_02759at 2881.483 kb on + strand, within OHPLBJKB_02759at 2881.505 kb on + strand, within OHPLBJKB_02759at 2881.505 kb on + strand, within OHPLBJKB_02759at 2881.506 kb on - strand, within OHPLBJKB_02759at 2881.506 kb on - strand, within OHPLBJKB_02759at 2881.686 kb on + strand, within OHPLBJKB_02759at 2881.687 kb on - strand, within OHPLBJKB_02759at 2881.738 kb on + strand, within OHPLBJKB_02759at 2881.739 kb on - strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.740 kb on + strand, within OHPLBJKB_02759at 2881.741 kb on - strand, within OHPLBJKB_02759at 2881.741 kb on - strand, within OHPLBJKB_02759at 2881.741 kb on - strand, within OHPLBJKB_02759at 2881.741 kb on - strand, within OHPLBJKB_02759at 2881.741 kb on - strand, within OHPLBJKB_02759at 2881.747 kb on + strand, within OHPLBJKB_02759at 2881.747 kb on + strand, within OHPLBJKB_02759at 2881.749 kb on + strand, within OHPLBJKB_02759at 2881.750 kb on - strand, within OHPLBJKB_02759at 2881.750 kb on - strand, within OHPLBJKB_02759at 2881.750 kb on - strand, within OHPLBJKB_02759at 2881.750 kb on - strand, within OHPLBJKB_02759at 2881.768 kb on + strand, within OHPLBJKB_02759at 2881.771 kb on + strand, within OHPLBJKB_02759at 2881.772 kb on - strand, within OHPLBJKB_02759at 2881.772 kb on - strand, within OHPLBJKB_02759at 2881.772 kb on - strand, within OHPLBJKB_02759at 2881.816 kb on - strand, within OHPLBJKB_02759at 2881.816 kb on - strand, within OHPLBJKB_02759at 2881.915 kb on + strand, within OHPLBJKB_02759at 2881.916 kb on - strand, within OHPLBJKB_02759at 2881.925 kb on + strand, within OHPLBJKB_02759at 2881.926 kb on - strand, within OHPLBJKB_02759at 2881.926 kb on - strand, within OHPLBJKB_02759at 2882.060 kb on + strandat 2882.061 kb on - strandat 2882.083 kb on - strandat 2882.181 kb on - strandat 2882.238 kb on + strandat 2882.290 kb on + strandat 2882.291 kb on - strandat 2882.340 kb on + strand, within OHPLBJKB_02760at 2882.340 kb on + strand, within OHPLBJKB_02760at 2882.340 kb on + strand, within OHPLBJKB_02760at 2882.341 kb on - strand, within OHPLBJKB_02760at 2882.341 kb on - strand, within OHPLBJKB_02760at 2882.341 kb on - strand, within OHPLBJKB_02760at 2882.341 kb on - strand, within OHPLBJKB_02760at 2882.341 kb on - strand, within OHPLBJKB_02760at 2882.391 kb on + strand, within OHPLBJKB_02760at 2882.392 kb on - strand, within OHPLBJKB_02760at 2882.392 kb on - strand, within OHPLBJKB_02760at 2882.392 kb on - strand, within OHPLBJKB_02760at 2882.392 kb on - strand, within OHPLBJKB_02760at 2882.425 kb on + strand, within OHPLBJKB_02760at 2882.425 kb on + strand, within OHPLBJKB_02760at 2882.479 kb on + strand, within OHPLBJKB_02760at 2882.481 kb on + strand, within OHPLBJKB_02760at 2882.481 kb on + strand, within OHPLBJKB_02760at 2882.481 kb on + strand, within OHPLBJKB_02760at 2882.481 kb on + strand, within OHPLBJKB_02760at 2882.482 kb on - strand, within OHPLBJKB_02760at 2882.482 kb on - strand, within OHPLBJKB_02760at 2882.482 kb on - strand, within OHPLBJKB_02760at 2882.517 kb on - strand, within OHPLBJKB_02760at 2882.554 kb on + strand, within OHPLBJKB_02760at 2882.563 kb on + strand, within OHPLBJKB_02760at 2882.575 kb on + strand, within OHPLBJKB_02760at 2882.576 kb on - strand, within OHPLBJKB_02760at 2882.605 kb on + strand, within OHPLBJKB_02760at 2882.606 kb on - strand, within OHPLBJKB_02760at 2882.608 kb on - strand, within OHPLBJKB_02760at 2882.608 kb on - strand, within OHPLBJKB_02760at 2882.684 kb on - strand, within OHPLBJKB_02760at 2882.684 kb on - strand, within OHPLBJKB_02760at 2882.743 kb on - strand, within OHPLBJKB_02760at 2882.775 kb on + strand, within OHPLBJKB_02760at 2882.775 kb on + strand, within OHPLBJKB_02760at 2882.775 kb on + strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.776 kb on - strand, within OHPLBJKB_02760at 2882.794 kb on - strand, within OHPLBJKB_02760at 2882.886 kb on + strand, within OHPLBJKB_02760at 2882.886 kb on + strand, within OHPLBJKB_02760at 2882.886 kb on + strand, within OHPLBJKB_02760at 2882.886 kb on + strand, within OHPLBJKB_02760at 2882.887 kb on - strand, within OHPLBJKB_02760at 2883.043 kb on - strand, within OHPLBJKB_02760at 2883.060 kb on + strand, within OHPLBJKB_02760at 2883.060 kb on + strand, within OHPLBJKB_02760at 2883.239 kb on + strand, within OHPLBJKB_02760at 2883.292 kb on + strand, within OHPLBJKB_02760at 2883.293 kb on - strand, within OHPLBJKB_02760at 2883.293 kb on - strand, within OHPLBJKB_02760at 2883.294 kb on + strand, within OHPLBJKB_02760at 2883.294 kb on + strand, within OHPLBJKB_02760at 2883.294 kb on + strand, within OHPLBJKB_02760at 2883.294 kb on + strand, within OHPLBJKB_02760at 2883.295 kb on - strand, within OHPLBJKB_02760at 2883.295 kb on - strand, within OHPLBJKB_02760at 2883.329 kb on - strand, within OHPLBJKB_02760at 2883.363 kb on - strandat 2883.366 kb on - strandat 2883.366 kb on - strandat 2883.398 kb on + strandat 2883.399 kb on - strandat 2883.467 kb on + strandat 2883.468 kb on - strandat 2883.468 kb on - strandat 2883.539 kb on - strandat 2883.817 kb on - strand, within OHPLBJKB_02761at 2884.210 kb on + strand, within OHPLBJKB_02761

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Per-strain Table

Position Strand Gene LocusTag Fraction No phage
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2,881,215 - +0.9
2,881,226 - -0.3
2,881,226 - +0.1
2,881,269 + +0.6
2,881,270 - +1.0
2,881,270 - -0.8
2,881,270 - -0.6
2,881,270 - -0.1
2,881,273 + +0.1
2,881,286 - -1.9
2,881,460 - OHPLBJKB_02759 0.25 -0.4
2,881,470 + OHPLBJKB_02759 0.26 -1.6
2,881,471 - OHPLBJKB_02759 0.27 +2.2
2,881,474 + OHPLBJKB_02759 0.27 -0.8
2,881,474 + OHPLBJKB_02759 0.27 -0.0
2,881,475 - OHPLBJKB_02759 0.27 -0.9
2,881,483 + OHPLBJKB_02759 0.28 -0.3
2,881,505 + OHPLBJKB_02759 0.31 -0.6
2,881,505 + OHPLBJKB_02759 0.31 -1.6
2,881,506 - OHPLBJKB_02759 0.31 -1.1
2,881,506 - OHPLBJKB_02759 0.31 -1.0
2,881,686 + OHPLBJKB_02759 0.55 +1.1
2,881,687 - OHPLBJKB_02759 0.55 +0.7
2,881,738 + OHPLBJKB_02759 0.61 -0.4
2,881,739 - OHPLBJKB_02759 0.62 -1.0
2,881,740 + OHPLBJKB_02759 0.62 +0.4
2,881,740 + OHPLBJKB_02759 0.62 +0.3
2,881,740 + OHPLBJKB_02759 0.62 +0.7
2,881,740 + OHPLBJKB_02759 0.62 -1.1
2,881,740 + OHPLBJKB_02759 0.62 -0.5
2,881,740 + OHPLBJKB_02759 0.62 +1.8
2,881,740 + OHPLBJKB_02759 0.62 -1.3
2,881,740 + OHPLBJKB_02759 0.62 +0.9
2,881,741 - OHPLBJKB_02759 0.62 +0.2
2,881,741 - OHPLBJKB_02759 0.62 +0.4
2,881,741 - OHPLBJKB_02759 0.62 +1.3
2,881,741 - OHPLBJKB_02759 0.62 +0.4
2,881,741 - OHPLBJKB_02759 0.62 -0.6
2,881,747 + OHPLBJKB_02759 0.63 -1.5
2,881,747 + OHPLBJKB_02759 0.63 +1.7
2,881,749 + OHPLBJKB_02759 0.63 -2.6
2,881,750 - OHPLBJKB_02759 0.63 -1.1
2,881,750 - OHPLBJKB_02759 0.63 -0.4
2,881,750 - OHPLBJKB_02759 0.63 -2.9
2,881,750 - OHPLBJKB_02759 0.63 +0.2
2,881,768 + OHPLBJKB_02759 0.65 -2.5
2,881,771 + OHPLBJKB_02759 0.66 -0.4
2,881,772 - OHPLBJKB_02759 0.66 +0.6
2,881,772 - OHPLBJKB_02759 0.66 +0.3
2,881,772 - OHPLBJKB_02759 0.66 -1.1
2,881,816 - OHPLBJKB_02759 0.72 -1.1
2,881,816 - OHPLBJKB_02759 0.72 -0.0
2,881,915 + OHPLBJKB_02759 0.85 -1.6
2,881,916 - OHPLBJKB_02759 0.85 +0.3
2,881,925 + OHPLBJKB_02759 0.86 +0.1
2,881,926 - OHPLBJKB_02759 0.86 -1.6
2,881,926 - OHPLBJKB_02759 0.86 +0.2
2,882,060 + -1.3
2,882,061 - -0.1
2,882,083 - -1.0
2,882,181 - -0.3
2,882,238 + +0.1
2,882,290 + +1.2
2,882,291 - -0.9
2,882,340 + OHPLBJKB_02760 0.11 -1.1
2,882,340 + OHPLBJKB_02760 0.11 +1.3
2,882,340 + OHPLBJKB_02760 0.11 -0.5
2,882,341 - OHPLBJKB_02760 0.11 -1.6
2,882,341 - OHPLBJKB_02760 0.11 -1.1
2,882,341 - OHPLBJKB_02760 0.11 -0.9
2,882,341 - OHPLBJKB_02760 0.11 +0.4
2,882,341 - OHPLBJKB_02760 0.11 +0.3
2,882,391 + OHPLBJKB_02760 0.15 -0.6
2,882,392 - OHPLBJKB_02760 0.15 +0.9
2,882,392 - OHPLBJKB_02760 0.15 -3.1
2,882,392 - OHPLBJKB_02760 0.15 +1.3
2,882,392 - OHPLBJKB_02760 0.15 -1.9
2,882,425 + OHPLBJKB_02760 0.17 +1.4
2,882,425 + OHPLBJKB_02760 0.17 -0.2
2,882,479 + OHPLBJKB_02760 0.22 +1.1
2,882,481 + OHPLBJKB_02760 0.22 -2.0
2,882,481 + OHPLBJKB_02760 0.22 +0.7
2,882,481 + OHPLBJKB_02760 0.22 +0.7
2,882,481 + OHPLBJKB_02760 0.22 +0.4
2,882,482 - OHPLBJKB_02760 0.22 -0.7
2,882,482 - OHPLBJKB_02760 0.22 -2.1
2,882,482 - OHPLBJKB_02760 0.22 -1.0
2,882,517 - OHPLBJKB_02760 0.25 +0.1
2,882,554 + OHPLBJKB_02760 0.27 -0.4
2,882,563 + OHPLBJKB_02760 0.28 +0.1
2,882,575 + OHPLBJKB_02760 0.29 +1.7
2,882,576 - OHPLBJKB_02760 0.29 -0.4
2,882,605 + OHPLBJKB_02760 0.31 -0.4
2,882,606 - OHPLBJKB_02760 0.32 -0.6
2,882,608 - OHPLBJKB_02760 0.32 +0.9
2,882,608 - OHPLBJKB_02760 0.32 -2.4
2,882,684 - OHPLBJKB_02760 0.38 +0.3
2,882,684 - OHPLBJKB_02760 0.38 -0.6
2,882,743 - OHPLBJKB_02760 0.42 -0.9
2,882,775 + OHPLBJKB_02760 0.45 +0.7
2,882,775 + OHPLBJKB_02760 0.45 -1.0
2,882,775 + OHPLBJKB_02760 0.45 +0.1
2,882,776 - OHPLBJKB_02760 0.45 +0.2
2,882,776 - OHPLBJKB_02760 0.45 +0.2
2,882,776 - OHPLBJKB_02760 0.45 -1.4
2,882,776 - OHPLBJKB_02760 0.45 -1.1
2,882,776 - OHPLBJKB_02760 0.45 -0.6
2,882,776 - OHPLBJKB_02760 0.45 -2.6
2,882,794 - OHPLBJKB_02760 0.46 -0.6
2,882,886 + OHPLBJKB_02760 0.53 +0.4
2,882,886 + OHPLBJKB_02760 0.53 -1.7
2,882,886 + OHPLBJKB_02760 0.53 +0.7
2,882,886 + OHPLBJKB_02760 0.53 +1.4
2,882,887 - OHPLBJKB_02760 0.53 -0.9
2,883,043 - OHPLBJKB_02760 0.66 -1.6
2,883,060 + OHPLBJKB_02760 0.67 -0.6
2,883,060 + OHPLBJKB_02760 0.67 -0.4
2,883,239 + OHPLBJKB_02760 0.81 -1.4
2,883,292 + OHPLBJKB_02760 0.85 -0.1
2,883,293 - OHPLBJKB_02760 0.85 -2.4
2,883,293 - OHPLBJKB_02760 0.85 -2.3
2,883,294 + OHPLBJKB_02760 0.85 +0.0
2,883,294 + OHPLBJKB_02760 0.85 -1.4
2,883,294 + OHPLBJKB_02760 0.85 +1.1
2,883,294 + OHPLBJKB_02760 0.85 +0.8
2,883,295 - OHPLBJKB_02760 0.85 -2.0
2,883,295 - OHPLBJKB_02760 0.85 +0.4
2,883,329 - OHPLBJKB_02760 0.88 +0.6
2,883,363 - +0.1
2,883,366 - +0.1
2,883,366 - +0.4
2,883,398 + +0.4
2,883,399 - -1.4
2,883,467 + +2.4
2,883,468 - -1.6
2,883,468 - +0.3
2,883,539 - +1.3
2,883,817 - OHPLBJKB_02761 0.24 +1.4
2,884,210 + OHPLBJKB_02761 0.60 -0.9

Or see this region's nucleotide sequence