Experiment: No phage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02759 and OHPLBJKB_02760 are separated by 168 nucleotides OHPLBJKB_02760 and OHPLBJKB_02761 are separated by 70 nucleotides
OHPLBJKB_02759: OHPLBJKB_02759 - putative metalloprotease YcaL, at 2,881,268 to 2,882,032
_02759
OHPLBJKB_02760: OHPLBJKB_02760 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,882,201 to 2,883,484
_02760
OHPLBJKB_02761: OHPLBJKB_02761 - Phosphoserine aminotransferase, at 2,883,555 to 2,884,643
_02761
Position (kb)
2882
2883
2884 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2881.215 kb on - strand at 2881.226 kb on - strand at 2881.226 kb on - strand at 2881.269 kb on + strand at 2881.270 kb on - strand at 2881.270 kb on - strand at 2881.270 kb on - strand at 2881.270 kb on - strand at 2881.273 kb on + strand at 2881.286 kb on - strand at 2881.460 kb on - strand, within OHPLBJKB_02759 at 2881.470 kb on + strand, within OHPLBJKB_02759 at 2881.471 kb on - strand, within OHPLBJKB_02759 at 2881.474 kb on + strand, within OHPLBJKB_02759 at 2881.474 kb on + strand, within OHPLBJKB_02759 at 2881.475 kb on - strand, within OHPLBJKB_02759 at 2881.483 kb on + strand, within OHPLBJKB_02759 at 2881.505 kb on + strand, within OHPLBJKB_02759 at 2881.505 kb on + strand, within OHPLBJKB_02759 at 2881.506 kb on - strand, within OHPLBJKB_02759 at 2881.506 kb on - strand, within OHPLBJKB_02759 at 2881.686 kb on + strand, within OHPLBJKB_02759 at 2881.687 kb on - strand, within OHPLBJKB_02759 at 2881.738 kb on + strand, within OHPLBJKB_02759 at 2881.739 kb on - strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.740 kb on + strand, within OHPLBJKB_02759 at 2881.741 kb on - strand, within OHPLBJKB_02759 at 2881.741 kb on - strand, within OHPLBJKB_02759 at 2881.741 kb on - strand, within OHPLBJKB_02759 at 2881.741 kb on - strand, within OHPLBJKB_02759 at 2881.741 kb on - strand, within OHPLBJKB_02759 at 2881.747 kb on + strand, within OHPLBJKB_02759 at 2881.747 kb on + strand, within OHPLBJKB_02759 at 2881.749 kb on + strand, within OHPLBJKB_02759 at 2881.750 kb on - strand, within OHPLBJKB_02759 at 2881.750 kb on - strand, within OHPLBJKB_02759 at 2881.750 kb on - strand, within OHPLBJKB_02759 at 2881.750 kb on - strand, within OHPLBJKB_02759 at 2881.768 kb on + strand, within OHPLBJKB_02759 at 2881.771 kb on + strand, within OHPLBJKB_02759 at 2881.772 kb on - strand, within OHPLBJKB_02759 at 2881.772 kb on - strand, within OHPLBJKB_02759 at 2881.772 kb on - strand, within OHPLBJKB_02759 at 2881.816 kb on - strand, within OHPLBJKB_02759 at 2881.816 kb on - strand, within OHPLBJKB_02759 at 2881.915 kb on + strand, within OHPLBJKB_02759 at 2881.916 kb on - strand, within OHPLBJKB_02759 at 2881.925 kb on + strand, within OHPLBJKB_02759 at 2881.926 kb on - strand, within OHPLBJKB_02759 at 2881.926 kb on - strand, within OHPLBJKB_02759 at 2882.060 kb on + strand at 2882.061 kb on - strand at 2882.083 kb on - strand at 2882.181 kb on - strand at 2882.238 kb on + strand at 2882.290 kb on + strand at 2882.291 kb on - strand at 2882.340 kb on + strand, within OHPLBJKB_02760 at 2882.340 kb on + strand, within OHPLBJKB_02760 at 2882.340 kb on + strand, within OHPLBJKB_02760 at 2882.341 kb on - strand, within OHPLBJKB_02760 at 2882.341 kb on - strand, within OHPLBJKB_02760 at 2882.341 kb on - strand, within OHPLBJKB_02760 at 2882.341 kb on - strand, within OHPLBJKB_02760 at 2882.341 kb on - strand, within OHPLBJKB_02760 at 2882.391 kb on + strand, within OHPLBJKB_02760 at 2882.392 kb on - strand, within OHPLBJKB_02760 at 2882.392 kb on - strand, within OHPLBJKB_02760 at 2882.392 kb on - strand, within OHPLBJKB_02760 at 2882.392 kb on - strand, within OHPLBJKB_02760 at 2882.425 kb on + strand, within OHPLBJKB_02760 at 2882.425 kb on + strand, within OHPLBJKB_02760 at 2882.479 kb on + strand, within OHPLBJKB_02760 at 2882.481 kb on + strand, within OHPLBJKB_02760 at 2882.481 kb on + strand, within OHPLBJKB_02760 at 2882.481 kb on + strand, within OHPLBJKB_02760 at 2882.481 kb on + strand, within OHPLBJKB_02760 at 2882.482 kb on - strand, within OHPLBJKB_02760 at 2882.482 kb on - strand, within OHPLBJKB_02760 at 2882.482 kb on - strand, within OHPLBJKB_02760 at 2882.517 kb on - strand, within OHPLBJKB_02760 at 2882.554 kb on + strand, within OHPLBJKB_02760 at 2882.563 kb on + strand, within OHPLBJKB_02760 at 2882.575 kb on + strand, within OHPLBJKB_02760 at 2882.576 kb on - strand, within OHPLBJKB_02760 at 2882.605 kb on + strand, within OHPLBJKB_02760 at 2882.606 kb on - strand, within OHPLBJKB_02760 at 2882.608 kb on - strand, within OHPLBJKB_02760 at 2882.608 kb on - strand, within OHPLBJKB_02760 at 2882.684 kb on - strand, within OHPLBJKB_02760 at 2882.684 kb on - strand, within OHPLBJKB_02760 at 2882.743 kb on - strand, within OHPLBJKB_02760 at 2882.775 kb on + strand, within OHPLBJKB_02760 at 2882.775 kb on + strand, within OHPLBJKB_02760 at 2882.775 kb on + strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.776 kb on - strand, within OHPLBJKB_02760 at 2882.794 kb on - strand, within OHPLBJKB_02760 at 2882.886 kb on + strand, within OHPLBJKB_02760 at 2882.886 kb on + strand, within OHPLBJKB_02760 at 2882.886 kb on + strand, within OHPLBJKB_02760 at 2882.886 kb on + strand, within OHPLBJKB_02760 at 2882.887 kb on - strand, within OHPLBJKB_02760 at 2883.043 kb on - strand, within OHPLBJKB_02760 at 2883.060 kb on + strand, within OHPLBJKB_02760 at 2883.060 kb on + strand, within OHPLBJKB_02760 at 2883.239 kb on + strand, within OHPLBJKB_02760 at 2883.292 kb on + strand, within OHPLBJKB_02760 at 2883.293 kb on - strand, within OHPLBJKB_02760 at 2883.293 kb on - strand, within OHPLBJKB_02760 at 2883.294 kb on + strand, within OHPLBJKB_02760 at 2883.294 kb on + strand, within OHPLBJKB_02760 at 2883.294 kb on + strand, within OHPLBJKB_02760 at 2883.294 kb on + strand, within OHPLBJKB_02760 at 2883.295 kb on - strand, within OHPLBJKB_02760 at 2883.295 kb on - strand, within OHPLBJKB_02760 at 2883.329 kb on - strand, within OHPLBJKB_02760 at 2883.363 kb on - strand at 2883.366 kb on - strand at 2883.366 kb on - strand at 2883.398 kb on + strand at 2883.399 kb on - strand at 2883.467 kb on + strand at 2883.468 kb on - strand at 2883.468 kb on - strand at 2883.539 kb on - strand at 2883.817 kb on - strand, within OHPLBJKB_02761 at 2884.210 kb on + strand, within OHPLBJKB_02761
Per-strain Table
Position Strand Gene LocusTag Fraction No phage remove 2,881,215 - +0.9 2,881,226 - -0.3 2,881,226 - +0.1 2,881,269 + +0.6 2,881,270 - +1.0 2,881,270 - -0.8 2,881,270 - -0.6 2,881,270 - -0.1 2,881,273 + +0.1 2,881,286 - -1.9 2,881,460 - OHPLBJKB_02759 0.25 -0.4 2,881,470 + OHPLBJKB_02759 0.26 -1.6 2,881,471 - OHPLBJKB_02759 0.27 +2.2 2,881,474 + OHPLBJKB_02759 0.27 -0.8 2,881,474 + OHPLBJKB_02759 0.27 -0.0 2,881,475 - OHPLBJKB_02759 0.27 -0.9 2,881,483 + OHPLBJKB_02759 0.28 -0.3 2,881,505 + OHPLBJKB_02759 0.31 -0.6 2,881,505 + OHPLBJKB_02759 0.31 -1.6 2,881,506 - OHPLBJKB_02759 0.31 -1.1 2,881,506 - OHPLBJKB_02759 0.31 -1.0 2,881,686 + OHPLBJKB_02759 0.55 +1.1 2,881,687 - OHPLBJKB_02759 0.55 +0.7 2,881,738 + OHPLBJKB_02759 0.61 -0.4 2,881,739 - OHPLBJKB_02759 0.62 -1.0 2,881,740 + OHPLBJKB_02759 0.62 +0.4 2,881,740 + OHPLBJKB_02759 0.62 +0.3 2,881,740 + OHPLBJKB_02759 0.62 +0.7 2,881,740 + OHPLBJKB_02759 0.62 -1.1 2,881,740 + OHPLBJKB_02759 0.62 -0.5 2,881,740 + OHPLBJKB_02759 0.62 +1.8 2,881,740 + OHPLBJKB_02759 0.62 -1.3 2,881,740 + OHPLBJKB_02759 0.62 +0.9 2,881,741 - OHPLBJKB_02759 0.62 +0.2 2,881,741 - OHPLBJKB_02759 0.62 +0.4 2,881,741 - OHPLBJKB_02759 0.62 +1.3 2,881,741 - OHPLBJKB_02759 0.62 +0.4 2,881,741 - OHPLBJKB_02759 0.62 -0.6 2,881,747 + OHPLBJKB_02759 0.63 -1.5 2,881,747 + OHPLBJKB_02759 0.63 +1.7 2,881,749 + OHPLBJKB_02759 0.63 -2.6 2,881,750 - OHPLBJKB_02759 0.63 -1.1 2,881,750 - OHPLBJKB_02759 0.63 -0.4 2,881,750 - OHPLBJKB_02759 0.63 -2.9 2,881,750 - OHPLBJKB_02759 0.63 +0.2 2,881,768 + OHPLBJKB_02759 0.65 -2.5 2,881,771 + OHPLBJKB_02759 0.66 -0.4 2,881,772 - OHPLBJKB_02759 0.66 +0.6 2,881,772 - OHPLBJKB_02759 0.66 +0.3 2,881,772 - OHPLBJKB_02759 0.66 -1.1 2,881,816 - OHPLBJKB_02759 0.72 -1.1 2,881,816 - OHPLBJKB_02759 0.72 -0.0 2,881,915 + OHPLBJKB_02759 0.85 -1.6 2,881,916 - OHPLBJKB_02759 0.85 +0.3 2,881,925 + OHPLBJKB_02759 0.86 +0.1 2,881,926 - OHPLBJKB_02759 0.86 -1.6 2,881,926 - OHPLBJKB_02759 0.86 +0.2 2,882,060 + -1.3 2,882,061 - -0.1 2,882,083 - -1.0 2,882,181 - -0.3 2,882,238 + +0.1 2,882,290 + +1.2 2,882,291 - -0.9 2,882,340 + OHPLBJKB_02760 0.11 -1.1 2,882,340 + OHPLBJKB_02760 0.11 +1.3 2,882,340 + OHPLBJKB_02760 0.11 -0.5 2,882,341 - OHPLBJKB_02760 0.11 -1.6 2,882,341 - OHPLBJKB_02760 0.11 -1.1 2,882,341 - OHPLBJKB_02760 0.11 -0.9 2,882,341 - OHPLBJKB_02760 0.11 +0.4 2,882,341 - OHPLBJKB_02760 0.11 +0.3 2,882,391 + OHPLBJKB_02760 0.15 -0.6 2,882,392 - OHPLBJKB_02760 0.15 +0.9 2,882,392 - OHPLBJKB_02760 0.15 -3.1 2,882,392 - OHPLBJKB_02760 0.15 +1.3 2,882,392 - OHPLBJKB_02760 0.15 -1.9 2,882,425 + OHPLBJKB_02760 0.17 +1.4 2,882,425 + OHPLBJKB_02760 0.17 -0.2 2,882,479 + OHPLBJKB_02760 0.22 +1.1 2,882,481 + OHPLBJKB_02760 0.22 -2.0 2,882,481 + OHPLBJKB_02760 0.22 +0.7 2,882,481 + OHPLBJKB_02760 0.22 +0.7 2,882,481 + OHPLBJKB_02760 0.22 +0.4 2,882,482 - OHPLBJKB_02760 0.22 -0.7 2,882,482 - OHPLBJKB_02760 0.22 -2.1 2,882,482 - OHPLBJKB_02760 0.22 -1.0 2,882,517 - OHPLBJKB_02760 0.25 +0.1 2,882,554 + OHPLBJKB_02760 0.27 -0.4 2,882,563 + OHPLBJKB_02760 0.28 +0.1 2,882,575 + OHPLBJKB_02760 0.29 +1.7 2,882,576 - OHPLBJKB_02760 0.29 -0.4 2,882,605 + OHPLBJKB_02760 0.31 -0.4 2,882,606 - OHPLBJKB_02760 0.32 -0.6 2,882,608 - OHPLBJKB_02760 0.32 +0.9 2,882,608 - OHPLBJKB_02760 0.32 -2.4 2,882,684 - OHPLBJKB_02760 0.38 +0.3 2,882,684 - OHPLBJKB_02760 0.38 -0.6 2,882,743 - OHPLBJKB_02760 0.42 -0.9 2,882,775 + OHPLBJKB_02760 0.45 +0.7 2,882,775 + OHPLBJKB_02760 0.45 -1.0 2,882,775 + OHPLBJKB_02760 0.45 +0.1 2,882,776 - OHPLBJKB_02760 0.45 +0.2 2,882,776 - OHPLBJKB_02760 0.45 +0.2 2,882,776 - OHPLBJKB_02760 0.45 -1.4 2,882,776 - OHPLBJKB_02760 0.45 -1.1 2,882,776 - OHPLBJKB_02760 0.45 -0.6 2,882,776 - OHPLBJKB_02760 0.45 -2.6 2,882,794 - OHPLBJKB_02760 0.46 -0.6 2,882,886 + OHPLBJKB_02760 0.53 +0.4 2,882,886 + OHPLBJKB_02760 0.53 -1.7 2,882,886 + OHPLBJKB_02760 0.53 +0.7 2,882,886 + OHPLBJKB_02760 0.53 +1.4 2,882,887 - OHPLBJKB_02760 0.53 -0.9 2,883,043 - OHPLBJKB_02760 0.66 -1.6 2,883,060 + OHPLBJKB_02760 0.67 -0.6 2,883,060 + OHPLBJKB_02760 0.67 -0.4 2,883,239 + OHPLBJKB_02760 0.81 -1.4 2,883,292 + OHPLBJKB_02760 0.85 -0.1 2,883,293 - OHPLBJKB_02760 0.85 -2.4 2,883,293 - OHPLBJKB_02760 0.85 -2.3 2,883,294 + OHPLBJKB_02760 0.85 +0.0 2,883,294 + OHPLBJKB_02760 0.85 -1.4 2,883,294 + OHPLBJKB_02760 0.85 +1.1 2,883,294 + OHPLBJKB_02760 0.85 +0.8 2,883,295 - OHPLBJKB_02760 0.85 -2.0 2,883,295 - OHPLBJKB_02760 0.85 +0.4 2,883,329 - OHPLBJKB_02760 0.88 +0.6 2,883,363 - +0.1 2,883,366 - +0.1 2,883,366 - +0.4 2,883,398 + +0.4 2,883,399 - -1.4 2,883,467 + +2.4 2,883,468 - -1.6 2,883,468 - +0.3 2,883,539 - +1.3 2,883,817 - OHPLBJKB_02761 0.24 +1.4 2,884,210 + OHPLBJKB_02761 0.60 -0.9
Or see this region's nucleotide sequence