Experiment: No phage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01721 and OHPLBJKB_01722 are separated by 37 nucleotides OHPLBJKB_01722 and OHPLBJKB_01723 are separated by 193 nucleotides OHPLBJKB_01723 and OHPLBJKB_01724 are separated by 100 nucleotides OHPLBJKB_01724 and OHPLBJKB_01725 are separated by 452 nucleotides
OHPLBJKB_01721: OHPLBJKB_01721 - HTH-type transcriptional regulator cbl, at 1,811,109 to 1,812,059
_01721
OHPLBJKB_01722: OHPLBJKB_01722 - tRNA-Asn, at 1,812,097 to 1,812,172
_01722
OHPLBJKB_01723: OHPLBJKB_01723 - putative FMN/FAD exporter YeeO, at 1,812,366 to 1,813,820
_01723
OHPLBJKB_01724: OHPLBJKB_01724 - tRNA-Asn, at 1,813,921 to 1,813,996
_01724
OHPLBJKB_01725: OHPLBJKB_01725 - putative transcriptional regulatory protein YeeN, at 1,814,449 to 1,815,165
_01725
Position (kb)
1812
1813
1814 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1811.378 kb on + strand, within OHPLBJKB_01721 at 1811.378 kb on + strand, within OHPLBJKB_01721 at 1811.379 kb on - strand, within OHPLBJKB_01721 at 1811.411 kb on + strand, within OHPLBJKB_01721 at 1811.412 kb on - strand, within OHPLBJKB_01721 at 1811.426 kb on + strand, within OHPLBJKB_01721 at 1811.426 kb on + strand, within OHPLBJKB_01721 at 1811.426 kb on + strand, within OHPLBJKB_01721 at 1811.426 kb on + strand, within OHPLBJKB_01721 at 1811.427 kb on - strand, within OHPLBJKB_01721 at 1811.427 kb on - strand, within OHPLBJKB_01721 at 1811.612 kb on + strand, within OHPLBJKB_01721 at 1811.612 kb on + strand, within OHPLBJKB_01721 at 1811.613 kb on - strand, within OHPLBJKB_01721 at 1811.613 kb on - strand, within OHPLBJKB_01721 at 1811.613 kb on - strand, within OHPLBJKB_01721 at 1811.613 kb on - strand, within OHPLBJKB_01721 at 1811.613 kb on - strand, within OHPLBJKB_01721 at 1811.697 kb on + strand, within OHPLBJKB_01721 at 1811.727 kb on - strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.765 kb on + strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.766 kb on - strand, within OHPLBJKB_01721 at 1811.770 kb on + strand, within OHPLBJKB_01721 at 1811.771 kb on - strand, within OHPLBJKB_01721 at 1811.773 kb on + strand, within OHPLBJKB_01721 at 1811.773 kb on + strand, within OHPLBJKB_01721 at 1811.773 kb on + strand, within OHPLBJKB_01721 at 1811.774 kb on - strand, within OHPLBJKB_01721 at 1811.774 kb on - strand, within OHPLBJKB_01721 at 1811.798 kb on + strand, within OHPLBJKB_01721 at 1811.805 kb on + strand, within OHPLBJKB_01721 at 1811.806 kb on - strand, within OHPLBJKB_01721 at 1811.833 kb on + strand, within OHPLBJKB_01721 at 1811.912 kb on + strand, within OHPLBJKB_01721 at 1811.913 kb on - strand, within OHPLBJKB_01721 at 1811.917 kb on + strand, within OHPLBJKB_01721 at 1811.917 kb on + strand, within OHPLBJKB_01721 at 1811.917 kb on + strand, within OHPLBJKB_01721 at 1811.918 kb on - strand, within OHPLBJKB_01721 at 1811.918 kb on - strand, within OHPLBJKB_01721 at 1811.951 kb on + strand, within OHPLBJKB_01721 at 1811.951 kb on + strand, within OHPLBJKB_01721 at 1811.952 kb on - strand, within OHPLBJKB_01721 at 1811.952 kb on - strand, within OHPLBJKB_01721 at 1811.952 kb on - strand, within OHPLBJKB_01721 at 1811.955 kb on + strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.956 kb on - strand, within OHPLBJKB_01721 at 1811.981 kb on + strand at 1812.005 kb on + strand at 1812.057 kb on + strand at 1812.058 kb on - strand at 1812.253 kb on + strand at 1812.356 kb on - strand at 1812.433 kb on - strand at 1812.433 kb on - strand at 1812.476 kb on + strand at 1812.587 kb on + strand, within OHPLBJKB_01723 at 1812.588 kb on - strand, within OHPLBJKB_01723 at 1812.626 kb on + strand, within OHPLBJKB_01723 at 1812.626 kb on + strand, within OHPLBJKB_01723 at 1812.627 kb on - strand, within OHPLBJKB_01723 at 1812.627 kb on - strand, within OHPLBJKB_01723 at 1812.629 kb on + strand, within OHPLBJKB_01723 at 1812.647 kb on + strand, within OHPLBJKB_01723 at 1812.740 kb on + strand, within OHPLBJKB_01723 at 1812.740 kb on + strand, within OHPLBJKB_01723 at 1812.741 kb on - strand, within OHPLBJKB_01723 at 1812.741 kb on - strand, within OHPLBJKB_01723 at 1812.800 kb on + strand, within OHPLBJKB_01723 at 1812.819 kb on + strand, within OHPLBJKB_01723 at 1812.819 kb on + strand, within OHPLBJKB_01723 at 1812.820 kb on - strand, within OHPLBJKB_01723 at 1812.844 kb on - strand, within OHPLBJKB_01723 at 1812.941 kb on + strand, within OHPLBJKB_01723 at 1812.947 kb on + strand, within OHPLBJKB_01723 at 1812.947 kb on + strand, within OHPLBJKB_01723 at 1812.948 kb on - strand, within OHPLBJKB_01723 at 1813.037 kb on + strand, within OHPLBJKB_01723 at 1813.037 kb on + strand, within OHPLBJKB_01723 at 1813.110 kb on + strand, within OHPLBJKB_01723 at 1813.137 kb on - strand, within OHPLBJKB_01723 at 1813.186 kb on + strand, within OHPLBJKB_01723 at 1813.190 kb on + strand, within OHPLBJKB_01723 at 1813.191 kb on - strand, within OHPLBJKB_01723 at 1813.514 kb on - strand, within OHPLBJKB_01723 at 1813.522 kb on + strand, within OHPLBJKB_01723 at 1813.522 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.527 kb on - strand, within OHPLBJKB_01723 at 1813.533 kb on - strand, within OHPLBJKB_01723 at 1813.569 kb on - strand, within OHPLBJKB_01723 at 1813.636 kb on + strand, within OHPLBJKB_01723 at 1813.637 kb on - strand, within OHPLBJKB_01723 at 1813.637 kb on - strand, within OHPLBJKB_01723 at 1813.731 kb on + strand at 1814.019 kb on + strand at 1814.019 kb on + strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.271 kb on + strand at 1814.271 kb on + strand at 1814.272 kb on - strand at 1814.668 kb on - strand, within OHPLBJKB_01725 at 1814.780 kb on + strand, within OHPLBJKB_01725
Per-strain Table
Position Strand Gene LocusTag Fraction No phage remove 1,811,378 + OHPLBJKB_01721 0.28 -0.3 1,811,378 + OHPLBJKB_01721 0.28 -2.5 1,811,379 - OHPLBJKB_01721 0.28 +0.7 1,811,411 + OHPLBJKB_01721 0.32 -0.4 1,811,412 - OHPLBJKB_01721 0.32 +0.3 1,811,426 + OHPLBJKB_01721 0.33 +0.8 1,811,426 + OHPLBJKB_01721 0.33 +0.1 1,811,426 + OHPLBJKB_01721 0.33 -0.7 1,811,426 + OHPLBJKB_01721 0.33 -0.4 1,811,427 - OHPLBJKB_01721 0.33 +2.1 1,811,427 - OHPLBJKB_01721 0.33 +0.7 1,811,612 + OHPLBJKB_01721 0.53 -0.3 1,811,612 + OHPLBJKB_01721 0.53 -1.5 1,811,613 - OHPLBJKB_01721 0.53 +0.4 1,811,613 - OHPLBJKB_01721 0.53 -2.9 1,811,613 - OHPLBJKB_01721 0.53 +0.7 1,811,613 - OHPLBJKB_01721 0.53 -0.2 1,811,613 - OHPLBJKB_01721 0.53 -0.8 1,811,697 + OHPLBJKB_01721 0.62 +1.2 1,811,727 - OHPLBJKB_01721 0.65 -0.4 1,811,765 + OHPLBJKB_01721 0.69 +1.1 1,811,765 + OHPLBJKB_01721 0.69 +1.2 1,811,765 + OHPLBJKB_01721 0.69 +1.3 1,811,765 + OHPLBJKB_01721 0.69 +1.8 1,811,765 + OHPLBJKB_01721 0.69 -0.4 1,811,765 + OHPLBJKB_01721 0.69 +1.3 1,811,765 + OHPLBJKB_01721 0.69 -0.6 1,811,766 - OHPLBJKB_01721 0.69 +0.1 1,811,766 - OHPLBJKB_01721 0.69 -1.4 1,811,766 - OHPLBJKB_01721 0.69 -0.4 1,811,766 - OHPLBJKB_01721 0.69 +0.1 1,811,766 - OHPLBJKB_01721 0.69 +0.5 1,811,766 - OHPLBJKB_01721 0.69 -0.1 1,811,766 - OHPLBJKB_01721 0.69 -1.3 1,811,766 - OHPLBJKB_01721 0.69 +0.8 1,811,766 - OHPLBJKB_01721 0.69 -1.7 1,811,766 - OHPLBJKB_01721 0.69 -0.2 1,811,770 + OHPLBJKB_01721 0.70 +1.4 1,811,771 - OHPLBJKB_01721 0.70 +0.8 1,811,773 + OHPLBJKB_01721 0.70 +0.4 1,811,773 + OHPLBJKB_01721 0.70 -0.1 1,811,773 + OHPLBJKB_01721 0.70 -0.2 1,811,774 - OHPLBJKB_01721 0.70 -0.3 1,811,774 - OHPLBJKB_01721 0.70 +0.2 1,811,798 + OHPLBJKB_01721 0.72 +0.6 1,811,805 + OHPLBJKB_01721 0.73 -1.7 1,811,806 - OHPLBJKB_01721 0.73 -0.3 1,811,833 + OHPLBJKB_01721 0.76 -0.8 1,811,912 + OHPLBJKB_01721 0.84 +0.7 1,811,913 - OHPLBJKB_01721 0.85 -0.1 1,811,917 + OHPLBJKB_01721 0.85 +0.0 1,811,917 + OHPLBJKB_01721 0.85 -1.4 1,811,917 + OHPLBJKB_01721 0.85 +1.0 1,811,918 - OHPLBJKB_01721 0.85 +0.1 1,811,918 - OHPLBJKB_01721 0.85 +1.0 1,811,951 + OHPLBJKB_01721 0.89 -0.1 1,811,951 + OHPLBJKB_01721 0.89 -1.5 1,811,952 - OHPLBJKB_01721 0.89 -0.4 1,811,952 - OHPLBJKB_01721 0.89 +0.2 1,811,952 - OHPLBJKB_01721 0.89 -0.2 1,811,955 + OHPLBJKB_01721 0.89 +0.3 1,811,956 - OHPLBJKB_01721 0.89 +2.0 1,811,956 - OHPLBJKB_01721 0.89 +0.4 1,811,956 - OHPLBJKB_01721 0.89 +1.3 1,811,956 - OHPLBJKB_01721 0.89 +0.1 1,811,956 - OHPLBJKB_01721 0.89 +0.1 1,811,956 - OHPLBJKB_01721 0.89 -0.5 1,811,981 + -0.6 1,812,005 + +1.0 1,812,057 + -2.8 1,812,058 - -0.3 1,812,253 + -0.2 1,812,356 - -0.3 1,812,433 - +0.4 1,812,433 - -0.7 1,812,476 + +0.8 1,812,587 + OHPLBJKB_01723 0.15 +0.0 1,812,588 - OHPLBJKB_01723 0.15 +0.8 1,812,626 + OHPLBJKB_01723 0.18 -0.3 1,812,626 + OHPLBJKB_01723 0.18 +2.4 1,812,627 - OHPLBJKB_01723 0.18 -1.1 1,812,627 - OHPLBJKB_01723 0.18 -0.3 1,812,629 + OHPLBJKB_01723 0.18 +0.7 1,812,647 + OHPLBJKB_01723 0.19 +1.0 1,812,740 + OHPLBJKB_01723 0.26 -2.4 1,812,740 + OHPLBJKB_01723 0.26 -0.2 1,812,741 - OHPLBJKB_01723 0.26 -1.2 1,812,741 - OHPLBJKB_01723 0.26 -0.9 1,812,800 + OHPLBJKB_01723 0.30 +0.4 1,812,819 + OHPLBJKB_01723 0.31 -1.7 1,812,819 + OHPLBJKB_01723 0.31 -0.6 1,812,820 - OHPLBJKB_01723 0.31 -0.2 1,812,844 - OHPLBJKB_01723 0.33 -1.3 1,812,941 + OHPLBJKB_01723 0.40 -1.7 1,812,947 + OHPLBJKB_01723 0.40 -0.7 1,812,947 + OHPLBJKB_01723 0.40 +0.5 1,812,948 - OHPLBJKB_01723 0.40 -1.9 1,813,037 + OHPLBJKB_01723 0.46 -0.1 1,813,037 + OHPLBJKB_01723 0.46 -0.6 1,813,110 + OHPLBJKB_01723 0.51 +0.1 1,813,137 - OHPLBJKB_01723 0.53 +0.3 1,813,186 + OHPLBJKB_01723 0.56 -0.5 1,813,190 + OHPLBJKB_01723 0.57 +0.2 1,813,191 - OHPLBJKB_01723 0.57 -0.1 1,813,514 - OHPLBJKB_01723 0.79 -0.5 1,813,522 + OHPLBJKB_01723 0.79 -1.5 1,813,522 + OHPLBJKB_01723 0.79 +0.8 1,813,526 + OHPLBJKB_01723 0.80 +0.1 1,813,526 + OHPLBJKB_01723 0.80 +0.4 1,813,526 + OHPLBJKB_01723 0.80 +1.0 1,813,527 - OHPLBJKB_01723 0.80 +0.8 1,813,533 - OHPLBJKB_01723 0.80 -0.9 1,813,569 - OHPLBJKB_01723 0.83 +0.1 1,813,636 + OHPLBJKB_01723 0.87 -1.4 1,813,637 - OHPLBJKB_01723 0.87 +0.4 1,813,637 - OHPLBJKB_01723 0.87 +0.3 1,813,731 + -3.3 1,814,019 + +0.8 1,814,019 + -2.3 1,814,199 - +0.3 1,814,199 - -0.5 1,814,199 - -2.0 1,814,199 - +1.0 1,814,271 + -0.7 1,814,271 + -1.8 1,814,272 - -0.2 1,814,668 - OHPLBJKB_01725 0.31 -1.7 1,814,780 + OHPLBJKB_01725 0.46 +1.4
Or see this region's nucleotide sequence