Experiment: Phage Lil 3 
Only strains with sufficient reads to estimate fitness are shown,
                   but the strain fitness values are still rather noisy and may be biased towards zero.
                   Strains near the edge of a gene are not shown as being associated with that
                   gene (they are in grey).
                   Strains in the central 10-90% of a gene are color coded by the insertion's strand.
                   Usually, "+" means that the selectable marker is encoded on the forward strand,
                   i.e., transcribed rightward. 
    
        
         
     
    
        
         
     
    
        
         
     
    
        
         
     
    
         
     
     
 
500 nt OHPLBJKB_01353 and OHPLBJKB_01354 overlap by 1 nucleotides OHPLBJKB_01354 and OHPLBJKB_01355 are separated by 107 nucleotides  
        
        OHPLBJKB_01353: OHPLBJKB_01353 - putative multidrug resistance protein EmrK, at 1,395,882 to 1,397,045 
         
        _01353 
         
        
        OHPLBJKB_01354: OHPLBJKB_01354 - putative multidrug resistance protein EmrY, at 1,397,045 to 1,398,583 
         
        _01354 
         
        
        OHPLBJKB_01355: OHPLBJKB_01355 - D-serine dehydratase, at 1,398,691 to 1,400,019 
         
        _01355 
         Position (kb)  
1397 
 
1398 
 
1399 Strain fitness (log2 ratio)  
-2 
 
-1 
 
0 
 
1 
 
2 
 
3 at 1396.209 kb on - strand, within OHPLBJKB_01353 at 1396.280 kb on - strand, within OHPLBJKB_01353 at 1396.402 kb on - strand, within OHPLBJKB_01353 at 1396.424 kb on - strand, within OHPLBJKB_01353 at 1396.478 kb on + strand, within OHPLBJKB_01353 at 1396.514 kb on + strand, within OHPLBJKB_01353 at 1396.515 kb on - strand, within OHPLBJKB_01353 at 1396.534 kb on - strand, within OHPLBJKB_01353 at 1396.536 kb on - strand, within OHPLBJKB_01353 at 1396.657 kb on + strand, within OHPLBJKB_01353 at 1396.680 kb on - strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.768 kb on + strand, within OHPLBJKB_01353 at 1396.769 kb on - strand, within OHPLBJKB_01353 at 1396.876 kb on + strand, within OHPLBJKB_01353 at 1396.892 kb on + strand, within OHPLBJKB_01353 at 1396.892 kb on + strand, within OHPLBJKB_01353 at 1396.893 kb on - strand, within OHPLBJKB_01353 at 1396.893 kb on - strand, within OHPLBJKB_01353 at 1396.962 kb on + strand at 1396.964 kb on + strand at 1397.012 kb on + strand at 1397.056 kb on + strand at 1397.150 kb on - strand at 1397.176 kb on - strand at 1397.284 kb on - strand, within OHPLBJKB_01354 at 1397.292 kb on + strand, within OHPLBJKB_01354 at 1397.683 kb on - strand, within OHPLBJKB_01354 at 1397.926 kb on + strand, within OHPLBJKB_01354 at 1397.960 kb on - strand, within OHPLBJKB_01354 at 1397.960 kb on - strand, within OHPLBJKB_01354 at 1398.145 kb on + strand, within OHPLBJKB_01354 at 1398.146 kb on - strand, within OHPLBJKB_01354 at 1398.202 kb on - strand, within OHPLBJKB_01354 at 1398.413 kb on + strand, within OHPLBJKB_01354 at 1398.414 kb on - strand, within OHPLBJKB_01354 at 1398.414 kb on - strand, within OHPLBJKB_01354 at 1398.520 kb on + strand at 1398.525 kb on + strand at 1398.526 kb on - strand at 1398.530 kb on - strand at 1398.587 kb on + strand at 1398.603 kb on + strand at 1398.625 kb on + strand at 1398.625 kb on + strand at 1398.625 kb on + strand at 1398.626 kb on - strand at 1398.626 kb on - strand at 1398.689 kb on + strand at 1398.690 kb on - strand at 1398.710 kb on + strand at 1398.817 kb on + strand at 1398.818 kb on - strand at 1398.879 kb on + strand, within OHPLBJKB_01355 at 1398.880 kb on - strand, within OHPLBJKB_01355 at 1398.914 kb on + strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.939 kb on - strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.197 kb on - strand, within OHPLBJKB_01355 at 1399.197 kb on - strand, within OHPLBJKB_01355 at 1399.255 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.374 kb on - strand, within OHPLBJKB_01355 at 1399.386 kb on - strand, within OHPLBJKB_01355 at 1399.399 kb on - strand, within OHPLBJKB_01355 at 1399.452 kb on + strand, within OHPLBJKB_01355 at 1399.453 kb on - strand, within OHPLBJKB_01355 at 1399.453 kb on - strand, within OHPLBJKB_01355 at 1399.489 kb on - strand, within OHPLBJKB_01355 at 1399.489 kb on - strand, within OHPLBJKB_01355  
 
 
 
Per-strain Table 
Position  Strand  Gene  LocusTag  Fraction   Phage Lil 3             remove   1,396,209   -    OHPLBJKB_01353   0.28  -0.8   1,396,280   -    OHPLBJKB_01353   0.34  +0.8   1,396,402   -    OHPLBJKB_01353   0.45  +1.1   1,396,424   -    OHPLBJKB_01353   0.47  +0.9   1,396,478   +    OHPLBJKB_01353   0.51  +0.1   1,396,514   +    OHPLBJKB_01353   0.54  +0.1   1,396,515   -    OHPLBJKB_01353   0.54  -0.9   1,396,534   -    OHPLBJKB_01353   0.56  -0.4   1,396,536   -    OHPLBJKB_01353   0.56  -0.3   1,396,657   +    OHPLBJKB_01353   0.67  -1.5   1,396,680   -    OHPLBJKB_01353   0.69  +0.3   1,396,682   +    OHPLBJKB_01353   0.69  +0.1   1,396,682   +    OHPLBJKB_01353   0.69  +1.2   1,396,682   +    OHPLBJKB_01353   0.69  +1.0   1,396,768   +    OHPLBJKB_01353   0.76  -0.6   1,396,769   -    OHPLBJKB_01353   0.76  +2.9   1,396,876   +    OHPLBJKB_01353   0.85  +0.6   1,396,892   +    OHPLBJKB_01353   0.87  +0.4   1,396,892   +    OHPLBJKB_01353   0.87  -0.7   1,396,893   -    OHPLBJKB_01353   0.87  +1.4   1,396,893   -    OHPLBJKB_01353   0.87  -0.1   1,396,962   +        -0.6   1,396,964   +        +0.4   1,397,012   +        -1.6   1,397,056   +        -0.3   1,397,150   -        -0.8   1,397,176   -        -0.3   1,397,284   -    OHPLBJKB_01354   0.16  -0.5   1,397,292   +    OHPLBJKB_01354   0.16  +1.2   1,397,683   -    OHPLBJKB_01354   0.41  -0.8   1,397,926   +    OHPLBJKB_01354   0.57  +0.0   1,397,960   -    OHPLBJKB_01354   0.59  -0.7   1,397,960   -    OHPLBJKB_01354   0.59  -2.3   1,398,145   +    OHPLBJKB_01354   0.71  -1.3   1,398,146   -    OHPLBJKB_01354   0.72  -1.1   1,398,202   -    OHPLBJKB_01354   0.75  +0.3   1,398,413   +    OHPLBJKB_01354   0.89  -2.3   1,398,414   -    OHPLBJKB_01354   0.89  -0.5   1,398,414   -    OHPLBJKB_01354   0.89  +0.3   1,398,520   +        -0.3   1,398,525   +        -0.7   1,398,526   -        -1.1   1,398,530   -        +0.5   1,398,587   +        -1.0   1,398,603   +        +0.7   1,398,625   +        +0.4   1,398,625   +        -0.4   1,398,625   +        -0.9   1,398,626   -        -0.4   1,398,626   -        +0.1   1,398,689   +        +0.6   1,398,690   -        -1.5   1,398,710   +        -1.3   1,398,817   +        -1.3   1,398,818   -        +1.7   1,398,879   +    OHPLBJKB_01355   0.14  +0.9   1,398,880   -    OHPLBJKB_01355   0.14  +0.0   1,398,914   +    OHPLBJKB_01355   0.17  -1.9   1,398,915   -    OHPLBJKB_01355   0.17  +1.1   1,398,915   -    OHPLBJKB_01355   0.17  -0.2   1,398,915   -    OHPLBJKB_01355   0.17  +0.5   1,398,915   -    OHPLBJKB_01355   0.17  +0.7   1,398,915   -    OHPLBJKB_01355   0.17  -1.3   1,398,938   +    OHPLBJKB_01355   0.19  -2.0   1,398,938   +    OHPLBJKB_01355   0.19  +0.1   1,398,938   +    OHPLBJKB_01355   0.19  +0.9   1,398,939   -    OHPLBJKB_01355   0.19  +0.3   1,399,086   +    OHPLBJKB_01355   0.30  -1.1   1,399,086   +    OHPLBJKB_01355   0.30  +1.3   1,399,086   +    OHPLBJKB_01355   0.30  +0.5   1,399,086   +    OHPLBJKB_01355   0.30  -0.9   1,399,086   +    OHPLBJKB_01355   0.30  -0.7   1,399,086   +    OHPLBJKB_01355   0.30  +0.8   1,399,087   -    OHPLBJKB_01355   0.30  -0.8   1,399,087   -    OHPLBJKB_01355   0.30  -0.5   1,399,087   -    OHPLBJKB_01355   0.30  +1.8   1,399,087   -    OHPLBJKB_01355   0.30  -1.1   1,399,087   -    OHPLBJKB_01355   0.30  -0.5   1,399,197   -    OHPLBJKB_01355   0.38  +0.6   1,399,197   -    OHPLBJKB_01355   0.38  -0.3   1,399,255   -    OHPLBJKB_01355   0.42  -1.0   1,399,348   -    OHPLBJKB_01355   0.49  +0.7   1,399,348   -    OHPLBJKB_01355   0.49  -0.3   1,399,348   -    OHPLBJKB_01355   0.49  -1.5   1,399,374   -    OHPLBJKB_01355   0.51  +0.5   1,399,386   -    OHPLBJKB_01355   0.52  +0.2   1,399,399   -    OHPLBJKB_01355   0.53  +0.5   1,399,452   +    OHPLBJKB_01355   0.57  -0.5   1,399,453   -    OHPLBJKB_01355   0.57  -1.1   1,399,453   -    OHPLBJKB_01355   0.57  -0.7   1,399,489   -    OHPLBJKB_01355   0.60  +0.3   1,399,489   -    OHPLBJKB_01355   0.60  +0.0 
 
Or see this region's nucleotide sequence