Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01138

Experiment: Phage Lil 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Lil 3
1,164,296	-		OHPLBJKB_01136	0.79	-1.0
1,164,390	+		OHPLBJKB_01136	0.89	+1.0
1,164,390	+		OHPLBJKB_01136	0.89	+0.4
1,164,399	-				+1.0
1,164,399	-				-0.2
1,164,399	-				+0.2
1,164,405	+				+0.2
1,164,471	+				+2.4
1,164,472	-				+0.4
1,164,472	-				+0.4
1,164,555	-		OHPLBJKB_01137	0.14	-1.3
1,164,555	-		OHPLBJKB_01137	0.14	+0.1
1,164,607	+		OHPLBJKB_01137	0.25	+0.2
1,164,607	+		OHPLBJKB_01137	0.25	-0.8
1,164,608	-		OHPLBJKB_01137	0.25	-2.2
1,164,611	+		OHPLBJKB_01137	0.25	-0.2
1,164,611	+		OHPLBJKB_01137	0.25	-0.1
1,164,635	+		OHPLBJKB_01137	0.30	-1.8
1,164,635	+		OHPLBJKB_01137	0.30	+1.8
1,164,636	-		OHPLBJKB_01137	0.31	+1.1
1,164,636	-		OHPLBJKB_01137	0.31	-0.3
1,164,732	+		OHPLBJKB_01137	0.51	-0.1
1,164,732	+		OHPLBJKB_01137	0.51	-0.2
1,164,732	+		OHPLBJKB_01137	0.51	-1.2
1,164,732	+		OHPLBJKB_01137	0.51	-2.2
1,164,733	-		OHPLBJKB_01137	0.51	+0.6
1,164,733	-		OHPLBJKB_01137	0.51	-1.7
1,164,733	-		OHPLBJKB_01137	0.51	-0.4
1,164,733	-		OHPLBJKB_01137	0.51	-1.1
1,164,733	-		OHPLBJKB_01137	0.51	-0.5
1,164,733	-		OHPLBJKB_01137	0.51	-0.2
1,164,733	-		OHPLBJKB_01137	0.51	-1.5
1,164,733	-		OHPLBJKB_01137	0.51	+0.6
1,164,733	-		OHPLBJKB_01137	0.51	+1.2
1,164,733	-		OHPLBJKB_01137	0.51	-2.2
1,164,733	-		OHPLBJKB_01137	0.51	-0.2
1,164,734	+		OHPLBJKB_01137	0.51	-0.8
1,164,735	-		OHPLBJKB_01137	0.51	+0.4
1,164,735	-		OHPLBJKB_01137	0.51	-0.7
1,164,735	-		OHPLBJKB_01137	0.51	+0.2
1,164,735	-		OHPLBJKB_01137	0.51	-0.4
1,164,735	-		OHPLBJKB_01137	0.51	-2.9
1,164,735	-		OHPLBJKB_01137	0.51	+1.5
1,164,772	+		OHPLBJKB_01137	0.59	-0.0
1,164,808	+		OHPLBJKB_01137	0.66	-1.0
1,164,809	-		OHPLBJKB_01137	0.67	-0.6
1,164,809	-		OHPLBJKB_01137	0.67	-1.0
1,164,809	-		OHPLBJKB_01137	0.67	-2.2
1,164,809	-		OHPLBJKB_01137	0.67	-0.9
1,164,809	-		OHPLBJKB_01137	0.67	-1.0
1,164,809	-		OHPLBJKB_01137	0.67	+0.2
1,164,866	+		OHPLBJKB_01137	0.79	-0.2
1,164,867	-		OHPLBJKB_01137	0.79	-1.1
1,164,904	+		OHPLBJKB_01137	0.86	-0.0
1,164,904	+		OHPLBJKB_01137	0.86	-2.0
1,164,904	+		OHPLBJKB_01137	0.86	+0.1
1,164,995	+				+0.5
1,165,020	+				-1.2
1,165,065	-				-1.5
1,165,065	-				+1.8
1,165,065	-				-1.7
1,165,065	-				+0.0
1,165,069	+				-0.4
1,165,069	+				-1.0
1,165,088	+				+0.2
1,165,091	+				-3.3
1,165,122	-				+0.2
1,165,165	+				-1.3
1,165,376	+		OHPLBJKB_01138	0.12	+0.8
1,165,792	+		OHPLBJKB_01138	0.35	-1.4
1,165,801	+		OHPLBJKB_01138	0.35	-0.2
1,165,859	+		OHPLBJKB_01138	0.39	-1.7
1,165,941	+		OHPLBJKB_01138	0.43	-0.8
1,165,941	+		OHPLBJKB_01138	0.43	-2.2
1,166,049	+		OHPLBJKB_01138	0.49	-0.8
1,166,049	+		OHPLBJKB_01138	0.49	+1.0
1,166,051	+		OHPLBJKB_01138	0.49	-1.4
1,166,051	+		OHPLBJKB_01138	0.49	-0.2
1,166,084	+		OHPLBJKB_01138	0.51	-0.5
1,166,141	+		OHPLBJKB_01138	0.54	+0.2
1,166,279	+		OHPLBJKB_01138	0.62	-0.2
1,166,308	+		OHPLBJKB_01138	0.63	-1.0
1,166,312	+		OHPLBJKB_01138	0.64	+0.5
1,166,312	+		OHPLBJKB_01138	0.64	+1.8
1,166,347	+		OHPLBJKB_01138	0.66	-0.8
1,166,354	+		OHPLBJKB_01138	0.66	+1.0
1,166,405	+		OHPLBJKB_01138	0.69	-0.0
1,166,419	+		OHPLBJKB_01138	0.70	+2.8
1,166,422	+		OHPLBJKB_01138	0.70	-0.5
1,166,422	+		OHPLBJKB_01138	0.70	-0.4
1,166,422	+		OHPLBJKB_01138	0.70	-2.2
1,166,433	+		OHPLBJKB_01138	0.70	+0.6
1,166,545	+		OHPLBJKB_01138	0.77	-0.8
1,166,607	+		OHPLBJKB_01138	0.80	-1.5
1,166,613	+		OHPLBJKB_01138	0.80	-1.4
1,166,671	+		OHPLBJKB_01138	0.84	-0.5
1,166,878	+				+2.8
1,167,930	+				+1.0
1,167,957	-				+0.8