Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03224

Experiment: Phage Lil 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Lil 2
3,363,249	+		OHPLBJKB_03222	0.72	+0.9
3,363,249	+		OHPLBJKB_03222	0.72	-0.7
3,363,249	+		OHPLBJKB_03222	0.72	-0.4
3,363,249	+		OHPLBJKB_03222	0.72	-1.7
3,363,249	+		OHPLBJKB_03222	0.72	-0.3
3,363,250	-		OHPLBJKB_03222	0.72	+0.2
3,363,250	-		OHPLBJKB_03222	0.72	+0.2
3,363,255	+		OHPLBJKB_03222	0.73	-1.3
3,363,255	+		OHPLBJKB_03222	0.73	-0.9
3,363,255	+		OHPLBJKB_03222	0.73	+1.8
3,363,256	-		OHPLBJKB_03222	0.73	-0.9
3,363,308	-		OHPLBJKB_03222	0.77	+1.1
3,363,476	-		OHPLBJKB_03222	0.90	+0.2
3,363,494	-				+0.8
3,363,505	+				-0.1
3,363,505	+				-0.4
3,363,506	-				+1.9
3,363,524	-				-0.1
3,363,638	+				+0.3
3,363,673	-		OHPLBJKB_03223	0.11	-1.1
3,363,742	-		OHPLBJKB_03223	0.31	-1.2
3,363,742	-		OHPLBJKB_03223	0.31	-0.7
3,363,825	-		OHPLBJKB_03223	0.55	-1.2
3,363,904	-		OHPLBJKB_03223	0.79	+0.2
3,363,955	+				+0.9
3,363,975	+				+0.9
3,363,975	+				+0.2
3,363,975	+				+1.2
3,363,975	+				-0.9
3,363,976	-				-0.6
3,364,026	-				+0.9
3,364,076	-				-0.5
3,364,076	-				-0.3
3,364,101	+				-1.9
3,364,101	+				-1.1
3,364,121	+				-0.3
3,364,122	-				-0.5
3,364,145	+				+0.1
3,364,223	+				-0.8
3,364,223	+				-1.6
3,364,223	+				+0.3
3,364,224	-				-1.5
3,364,224	-				-0.4
3,364,224	-				+0.0
3,364,224	-				+0.7
3,364,224	-				+1.4
3,364,362	+		OHPLBJKB_03224	0.12	-0.4
3,364,513	-		OHPLBJKB_03224	0.20	-0.3
3,364,513	-		OHPLBJKB_03224	0.20	-1.3
3,364,539	-		OHPLBJKB_03224	0.21	-0.4
3,364,542	+		OHPLBJKB_03224	0.22	-1.1
3,364,543	-		OHPLBJKB_03224	0.22	-1.2
3,364,723	+		OHPLBJKB_03224	0.32	+0.0
3,364,724	-		OHPLBJKB_03224	0.32	+0.6
3,364,724	-		OHPLBJKB_03224	0.32	-1.2
3,364,770	-		OHPLBJKB_03224	0.34	+0.1
3,364,780	+		OHPLBJKB_03224	0.35	-0.2
3,364,813	-		OHPLBJKB_03224	0.37	-0.5
3,364,858	-		OHPLBJKB_03224	0.39	+1.0
3,364,858	-		OHPLBJKB_03224	0.39	-1.6
3,364,867	+		OHPLBJKB_03224	0.40	-0.1
3,365,056	-		OHPLBJKB_03224	0.51	-1.0
3,365,070	-		OHPLBJKB_03224	0.51	-0.8
3,365,070	-		OHPLBJKB_03224	0.51	-1.9
3,365,084	+		OHPLBJKB_03224	0.52	-0.1
3,365,223	+		OHPLBJKB_03224	0.60	+2.7
3,365,224	-		OHPLBJKB_03224	0.60	-1.5
3,365,225	+		OHPLBJKB_03224	0.60	-1.6
3,365,225	+		OHPLBJKB_03224	0.60	-0.8
3,365,225	+		OHPLBJKB_03224	0.60	-0.5
3,365,225	+		OHPLBJKB_03224	0.60	+0.3
3,365,225	+		OHPLBJKB_03224	0.60	+0.6
3,365,225	+		OHPLBJKB_03224	0.60	-1.7
3,365,226	-		OHPLBJKB_03224	0.60	-2.4
3,365,226	-		OHPLBJKB_03224	0.60	-1.2
3,365,226	-		OHPLBJKB_03224	0.60	-0.9
3,365,226	-		OHPLBJKB_03224	0.60	-0.3
3,365,226	-		OHPLBJKB_03224	0.60	-1.2
3,365,226	-		OHPLBJKB_03224	0.60	-0.7
3,365,375	+		OHPLBJKB_03224	0.68	-0.7
3,365,384	+		OHPLBJKB_03224	0.69	+0.9
3,365,384	+		OHPLBJKB_03224	0.69	-2.5
3,365,384	+		OHPLBJKB_03224	0.69	+0.5
3,365,384	+		OHPLBJKB_03224	0.69	+0.3
3,365,384	+		OHPLBJKB_03224	0.69	-0.1
3,365,384	+		OHPLBJKB_03224	0.69	+0.6
3,365,384	+		OHPLBJKB_03224	0.69	+1.2
3,365,384	+		OHPLBJKB_03224	0.69	+0.5
3,365,384	+		OHPLBJKB_03224	0.69	-0.4
3,365,384	+		OHPLBJKB_03224	0.69	-1.9
3,365,385	-		OHPLBJKB_03224	0.69	-1.0
3,365,385	-		OHPLBJKB_03224	0.69	+1.5
3,365,385	-		OHPLBJKB_03224	0.69	+0.2
3,365,387	-		OHPLBJKB_03224	0.69	-0.1
3,365,513	-		OHPLBJKB_03224	0.76	+0.1
3,365,523	-		OHPLBJKB_03224	0.77	-0.1
3,365,523	-		OHPLBJKB_03224	0.77	-1.5
3,365,726	+		OHPLBJKB_03224	0.88	+0.1
3,365,726	+		OHPLBJKB_03224	0.88	-1.2
3,365,727	-		OHPLBJKB_03224	0.88	-0.4
3,365,727	-		OHPLBJKB_03224	0.88	+0.6
3,365,932	-				+0.2
3,366,000	+				+0.8
3,366,000	+				+1.6
3,366,001	-				-0.9
3,366,001	-				-0.0
3,366,001	-				-0.5
3,366,001	-				-0.7
3,366,001	-				-0.8
3,366,001	-				+0.8
3,366,004	+				+0.7
3,366,004	+				+1.5
3,366,004	+				+0.7
3,366,005	-				-0.3
3,366,005	-				+0.9
3,366,061	+				+1.2
3,366,062	-				+0.3
3,366,083	-				-0.1
3,366,239	+		OHPLBJKB_03225	0.17	+0.3
3,366,240	-		OHPLBJKB_03225	0.17	+1.0
3,366,263	-		OHPLBJKB_03225	0.19	+1.5
3,366,263	-		OHPLBJKB_03225	0.19	+0.3
3,366,263	-		OHPLBJKB_03225	0.19	+1.9
3,366,319	-		OHPLBJKB_03225	0.22	-2.0
3,366,340	+		OHPLBJKB_03225	0.23	-1.2
3,366,341	-		OHPLBJKB_03225	0.23	+1.0
3,366,341	-		OHPLBJKB_03225	0.23	+0.6
3,366,350	+		OHPLBJKB_03225	0.24	-0.0
3,366,350	+		OHPLBJKB_03225	0.24	-1.0
3,366,350	+		OHPLBJKB_03225	0.24	-1.7
3,366,350	+		OHPLBJKB_03225	0.24	+0.3
3,366,350	+		OHPLBJKB_03225	0.24	+0.2
3,366,350	+		OHPLBJKB_03225	0.24	+0.3
3,366,350	+		OHPLBJKB_03225	0.24	+0.3
3,366,351	-		OHPLBJKB_03225	0.24	-0.4
3,366,351	-		OHPLBJKB_03225	0.24	+1.0
3,366,351	-		OHPLBJKB_03225	0.24	+1.3
3,366,461	+		OHPLBJKB_03225	0.30	-1.1
3,366,461	+		OHPLBJKB_03225	0.30	+1.8
3,366,461	+		OHPLBJKB_03225	0.30	+0.8
3,366,511	+		OHPLBJKB_03225	0.33	+0.3
3,366,511	+		OHPLBJKB_03225	0.33	+0.2
3,366,688	+		OHPLBJKB_03225	0.43	+0.1
3,366,688	+		OHPLBJKB_03225	0.43	-0.8
3,366,688	+		OHPLBJKB_03225	0.43	-0.4
3,366,692	+		OHPLBJKB_03225	0.43	-0.7
3,366,692	+		OHPLBJKB_03225	0.43	-0.5
3,366,693	-		OHPLBJKB_03225	0.43	-0.6
3,366,693	-		OHPLBJKB_03225	0.43	+1.7
3,366,693	-		OHPLBJKB_03225	0.43	+1.2
3,366,693	-		OHPLBJKB_03225	0.43	-3.0
3,366,693	-		OHPLBJKB_03225	0.43	-0.5
3,366,790	+		OHPLBJKB_03225	0.49	-0.2
3,366,790	+		OHPLBJKB_03225	0.49	-1.0
3,366,791	-		OHPLBJKB_03225	0.49	+0.5
3,366,808	+		OHPLBJKB_03225	0.50	+0.7
3,366,809	-		OHPLBJKB_03225	0.50	-0.4
3,366,851	+		OHPLBJKB_03225	0.52	-0.7
3,366,852	-		OHPLBJKB_03225	0.52	+0.8
3,366,852	-		OHPLBJKB_03225	0.52	+1.6
3,366,855	+		OHPLBJKB_03225	0.52	-0.0
3,366,855	+		OHPLBJKB_03225	0.52	+0.3
3,366,856	-		OHPLBJKB_03225	0.52	+1.6
3,366,856	-		OHPLBJKB_03225	0.52	-0.1
3,366,856	-		OHPLBJKB_03225	0.52	-0.2
3,366,856	-		OHPLBJKB_03225	0.52	+0.7
3,366,856	-		OHPLBJKB_03225	0.52	-0.3
3,366,856	-		OHPLBJKB_03225	0.52	-0.3
3,366,862	+		OHPLBJKB_03225	0.53	-1.3
3,366,862	+		OHPLBJKB_03225	0.53	-0.5
3,366,863	-		OHPLBJKB_03225	0.53	+0.8