Experiment: No phage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04116 and OHPLBJKB_04117 are separated by 155 nucleotides OHPLBJKB_04117 and OHPLBJKB_04118 are separated by 196 nucleotides
OHPLBJKB_04116: OHPLBJKB_04116 - 'Primosomal protein N'' transl_table=11, at 4,331,180 to 4,333,378
_04116
OHPLBJKB_04117: OHPLBJKB_04117 - HTH-type transcriptional repressor CytR, at 4,333,534 to 4,334,559
_04117
OHPLBJKB_04118: OHPLBJKB_04118 - Cell division protein FtsN, at 4,334,756 to 4,335,610
_04118
Position (kb)
4333
4334
4335 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4333.460 kb on + strand at 4333.489 kb on + strand at 4333.489 kb on + strand at 4333.490 kb on - strand at 4333.501 kb on + strand at 4333.501 kb on + strand at 4333.501 kb on + strand at 4333.501 kb on + strand at 4333.501 kb on + strand at 4333.502 kb on - strand at 4333.502 kb on - strand at 4333.502 kb on - strand at 4333.502 kb on - strand at 4333.502 kb on - strand at 4333.502 kb on - strand at 4333.504 kb on + strand at 4333.504 kb on + strand at 4333.505 kb on - strand at 4333.505 kb on - strand at 4333.505 kb on - strand at 4333.505 kb on - strand at 4333.599 kb on + strand at 4333.622 kb on + strand at 4333.623 kb on - strand at 4333.623 kb on - strand at 4333.635 kb on + strand at 4333.691 kb on - strand, within OHPLBJKB_04117 at 4333.726 kb on - strand, within OHPLBJKB_04117 at 4333.726 kb on - strand, within OHPLBJKB_04117 at 4333.726 kb on - strand, within OHPLBJKB_04117 at 4333.789 kb on - strand, within OHPLBJKB_04117 at 4333.826 kb on - strand, within OHPLBJKB_04117 at 4334.019 kb on + strand, within OHPLBJKB_04117 at 4334.020 kb on - strand, within OHPLBJKB_04117 at 4334.065 kb on + strand, within OHPLBJKB_04117 at 4334.066 kb on - strand, within OHPLBJKB_04117 at 4334.069 kb on + strand, within OHPLBJKB_04117 at 4334.069 kb on + strand, within OHPLBJKB_04117 at 4334.070 kb on - strand, within OHPLBJKB_04117 at 4334.070 kb on - strand, within OHPLBJKB_04117 at 4334.071 kb on + strand, within OHPLBJKB_04117 at 4334.071 kb on + strand, within OHPLBJKB_04117 at 4334.071 kb on + strand, within OHPLBJKB_04117 at 4334.100 kb on + strand, within OHPLBJKB_04117 at 4334.149 kb on + strand, within OHPLBJKB_04117 at 4334.179 kb on - strand, within OHPLBJKB_04117 at 4334.179 kb on - strand, within OHPLBJKB_04117 at 4334.194 kb on + strand, within OHPLBJKB_04117 at 4334.271 kb on + strand, within OHPLBJKB_04117 at 4334.454 kb on + strand, within OHPLBJKB_04117 at 4334.454 kb on + strand, within OHPLBJKB_04117 at 4334.454 kb on + strand, within OHPLBJKB_04117 at 4334.454 kb on + strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.455 kb on - strand, within OHPLBJKB_04117 at 4334.526 kb on + strand at 4334.527 kb on - strand at 4334.557 kb on + strand at 4334.557 kb on + strand at 4334.558 kb on - strand at 4334.562 kb on + strand at 4334.562 kb on + strand at 4334.562 kb on + strand at 4334.571 kb on - strand at 4334.604 kb on + strand at 4334.608 kb on + strand at 4334.608 kb on + strand at 4334.632 kb on + strand at 4334.636 kb on + strand at 4334.636 kb on + strand at 4334.636 kb on + strand at 4335.035 kb on - strand, within OHPLBJKB_04118 at 4335.202 kb on + strand, within OHPLBJKB_04118 at 4335.245 kb on - strand, within OHPLBJKB_04118
Per-strain Table
Position Strand Gene LocusTag Fraction No phage remove 4,333,460 + -0.2 4,333,489 + +0.1 4,333,489 + -0.2 4,333,490 - -0.2 4,333,501 + -0.1 4,333,501 + -0.2 4,333,501 + +0.6 4,333,501 + -0.8 4,333,501 + -1.1 4,333,502 - -1.2 4,333,502 - -0.6 4,333,502 - -0.3 4,333,502 - -0.4 4,333,502 - +1.2 4,333,502 - -3.3 4,333,504 + +0.3 4,333,504 + +0.1 4,333,505 - +0.8 4,333,505 - +0.4 4,333,505 - -0.7 4,333,505 - -0.7 4,333,599 + +1.4 4,333,622 + +1.9 4,333,623 - +0.2 4,333,623 - +0.3 4,333,635 + +0.3 4,333,691 - OHPLBJKB_04117 0.15 +0.8 4,333,726 - OHPLBJKB_04117 0.19 -1.2 4,333,726 - OHPLBJKB_04117 0.19 +0.2 4,333,726 - OHPLBJKB_04117 0.19 -0.7 4,333,789 - OHPLBJKB_04117 0.25 -2.9 4,333,826 - OHPLBJKB_04117 0.28 +3.1 4,334,019 + OHPLBJKB_04117 0.47 +0.8 4,334,020 - OHPLBJKB_04117 0.47 -0.6 4,334,065 + OHPLBJKB_04117 0.52 +1.3 4,334,066 - OHPLBJKB_04117 0.52 +0.8 4,334,069 + OHPLBJKB_04117 0.52 +1.6 4,334,069 + OHPLBJKB_04117 0.52 -1.1 4,334,070 - OHPLBJKB_04117 0.52 -0.3 4,334,070 - OHPLBJKB_04117 0.52 -0.4 4,334,071 + OHPLBJKB_04117 0.52 -1.1 4,334,071 + OHPLBJKB_04117 0.52 -0.3 4,334,071 + OHPLBJKB_04117 0.52 +1.0 4,334,100 + OHPLBJKB_04117 0.55 +0.1 4,334,149 + OHPLBJKB_04117 0.60 +1.6 4,334,179 - OHPLBJKB_04117 0.63 -0.5 4,334,179 - OHPLBJKB_04117 0.63 +0.4 4,334,194 + OHPLBJKB_04117 0.64 +1.8 4,334,271 + OHPLBJKB_04117 0.72 +0.2 4,334,454 + OHPLBJKB_04117 0.90 +0.2 4,334,454 + OHPLBJKB_04117 0.90 +1.4 4,334,454 + OHPLBJKB_04117 0.90 +0.8 4,334,454 + OHPLBJKB_04117 0.90 -0.2 4,334,455 - OHPLBJKB_04117 0.90 -0.6 4,334,455 - OHPLBJKB_04117 0.90 -0.8 4,334,455 - OHPLBJKB_04117 0.90 +0.6 4,334,455 - OHPLBJKB_04117 0.90 +0.9 4,334,455 - OHPLBJKB_04117 0.90 -1.1 4,334,455 - OHPLBJKB_04117 0.90 -0.5 4,334,455 - OHPLBJKB_04117 0.90 -0.5 4,334,526 + +0.3 4,334,527 - -0.1 4,334,557 + +0.1 4,334,557 + -0.3 4,334,558 - -0.1 4,334,562 + +0.6 4,334,562 + -0.1 4,334,562 + -0.8 4,334,571 - -0.6 4,334,604 + -1.9 4,334,608 + +0.1 4,334,608 + -1.5 4,334,632 + -0.9 4,334,636 + -0.5 4,334,636 + +2.1 4,334,636 + -0.7 4,335,035 - OHPLBJKB_04118 0.33 +0.9 4,335,202 + OHPLBJKB_04118 0.52 +0.3 4,335,245 - OHPLBJKB_04118 0.57 +1.1
Or see this region's nucleotide sequence