Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03462

Experiment: Phage Ame 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage Ame 1
3,619,599	+				+0.7
3,619,599	+				-1.4
3,619,641	-				+1.0
3,619,756	-		OHPLBJKB_03461	0.16	+0.1
3,619,758	+		OHPLBJKB_03461	0.16	+1.4
3,619,819	-		OHPLBJKB_03461	0.27	+2.4
3,619,825	+		OHPLBJKB_03461	0.28	-0.6
3,619,843	-		OHPLBJKB_03461	0.31	+0.4
3,619,843	-		OHPLBJKB_03461	0.31	+0.1
3,619,863	+		OHPLBJKB_03461	0.34	-0.9
3,619,970	+		OHPLBJKB_03461	0.53	+0.1
3,619,970	+		OHPLBJKB_03461	0.53	+0.9
3,619,971	-		OHPLBJKB_03461	0.53	-1.4
3,619,974	+		OHPLBJKB_03461	0.54	+1.4
3,620,087	-		OHPLBJKB_03461	0.73	-0.4
3,620,191	-				-0.4
3,620,245	+				-0.7
3,620,246	-				-0.4
3,620,246	-				-0.7
3,620,254	-				-1.3
3,620,274	+				-0.6
3,620,399	+				-0.0
3,620,405	-				-1.0
3,620,405	-				+0.0
3,620,413	+				-0.1
3,620,414	-				+0.4
3,620,416	+				+0.4
3,620,416	+				-0.3
3,620,417	-				-0.3
3,620,417	-				+0.7
3,620,417	-				+0.4
3,620,420	+				+0.2
3,620,420	+				-1.9
3,620,420	+				-0.1
3,620,421	-				+1.4
3,620,421	-				+0.5
3,620,431	-				-0.5
3,620,444	-				+0.8
3,620,525	+				-0.9
3,620,554	+		OHPLBJKB_03462	0.12	-1.8
3,620,561	-		OHPLBJKB_03462	0.13	-0.0
3,620,561	-		OHPLBJKB_03462	0.13	+2.1
3,620,566	+		OHPLBJKB_03462	0.14	-0.6
3,620,567	-		OHPLBJKB_03462	0.14	-0.1
3,620,567	-		OHPLBJKB_03462	0.14	-0.3
3,620,567	-		OHPLBJKB_03462	0.14	-0.5
3,620,568	+		OHPLBJKB_03462	0.14	-2.1
3,620,568	+		OHPLBJKB_03462	0.14	-0.7
3,620,568	+		OHPLBJKB_03462	0.14	-0.5
3,620,568	+		OHPLBJKB_03462	0.14	-0.1
3,620,569	-		OHPLBJKB_03462	0.14	+0.1
3,620,569	-		OHPLBJKB_03462	0.14	-2.5
3,620,569	-		OHPLBJKB_03462	0.14	+0.3
3,620,569	-		OHPLBJKB_03462	0.14	+0.8
3,620,569	-		OHPLBJKB_03462	0.14	+0.2
3,620,569	-		OHPLBJKB_03462	0.14	-1.7
3,620,569	-		OHPLBJKB_03462	0.14	+0.7
3,620,569	-		OHPLBJKB_03462	0.14	+0.5
3,620,569	-		OHPLBJKB_03462	0.14	-0.3
3,620,569	-		OHPLBJKB_03462	0.14	-0.0
3,620,606	-		OHPLBJKB_03462	0.17	-0.3
3,620,681	-		OHPLBJKB_03462	0.25	+0.1
3,620,716	+		OHPLBJKB_03462	0.28	-0.3
3,620,717	-		OHPLBJKB_03462	0.28	+0.6
3,620,830	+		OHPLBJKB_03462	0.39	-0.2
3,620,830	+		OHPLBJKB_03462	0.39	-1.2
3,620,830	+		OHPLBJKB_03462	0.39	-0.4
3,620,831	-		OHPLBJKB_03462	0.39	+0.4
3,620,831	-		OHPLBJKB_03462	0.39	+2.0
3,620,834	+		OHPLBJKB_03462	0.40	-0.6
3,620,835	-		OHPLBJKB_03462	0.40	+1.0
3,620,907	+		OHPLBJKB_03462	0.47	+0.3
3,620,907	+		OHPLBJKB_03462	0.47	-0.6
3,620,907	+		OHPLBJKB_03462	0.47	-0.8
3,620,908	-		OHPLBJKB_03462	0.47	+0.1
3,620,908	-		OHPLBJKB_03462	0.47	+0.2
3,620,908	-		OHPLBJKB_03462	0.47	-1.6
3,620,908	-		OHPLBJKB_03462	0.47	+1.4
3,620,960	-		OHPLBJKB_03462	0.52	-0.0
3,620,960	-		OHPLBJKB_03462	0.52	-0.8
3,620,960	-		OHPLBJKB_03462	0.52	+0.5
3,621,037	-		OHPLBJKB_03462	0.59	+0.1
3,621,037	-		OHPLBJKB_03462	0.59	-1.8
3,621,037	-		OHPLBJKB_03462	0.59	-1.0
3,621,099	+		OHPLBJKB_03462	0.65	+1.9
3,621,146	-		OHPLBJKB_03462	0.70	+1.2
3,621,211	+		OHPLBJKB_03462	0.76	-0.4
3,621,211	+		OHPLBJKB_03462	0.76	-0.4
3,621,313	+		OHPLBJKB_03462	0.86	+1.0
3,621,313	+		OHPLBJKB_03462	0.86	-0.8
3,621,313	+		OHPLBJKB_03462	0.86	+0.6
3,621,313	+		OHPLBJKB_03462	0.86	+1.0
3,621,313	+		OHPLBJKB_03462	0.86	-0.9
3,621,314	-		OHPLBJKB_03462	0.86	-2.3
3,621,314	-		OHPLBJKB_03462	0.86	-0.1
3,621,314	-		OHPLBJKB_03462	0.86	-0.6
3,621,314	-		OHPLBJKB_03462	0.86	-1.3
3,621,332	+		OHPLBJKB_03462	0.88	+0.4
3,621,391	+				-0.1
3,621,429	+				+0.3
3,621,429	+				-0.1
3,621,436	-				-1.0
3,621,436	-				+3.6
3,621,436	-				-1.4
3,621,450	-				+0.1
3,621,450	-				-2.1
3,621,564	+		OHPLBJKB_03463	0.17	-0.4
3,621,564	+		OHPLBJKB_03463	0.17	+0.4
3,621,565	-		OHPLBJKB_03463	0.18	-1.0
3,621,611	+		OHPLBJKB_03463	0.25	+1.4
3,621,656	+		OHPLBJKB_03463	0.31	+0.1
3,621,656	+		OHPLBJKB_03463	0.31	-1.6
3,621,701	+		OHPLBJKB_03463	0.38	-1.2
3,621,701	+		OHPLBJKB_03463	0.38	-0.1
3,621,702	-		OHPLBJKB_03463	0.39	-0.5
3,621,702	-		OHPLBJKB_03463	0.39	+0.1
3,621,902	+		OHPLBJKB_03463	0.69	+1.4
3,621,902	+		OHPLBJKB_03463	0.69	-0.0
3,621,902	+		OHPLBJKB_03463	0.69	-0.0
3,621,965	-		OHPLBJKB_03463	0.79	+0.4
3,621,965	-		OHPLBJKB_03463	0.79	-1.3
3,621,990	+		OHPLBJKB_03463	0.83	+0.4
3,621,991	-		OHPLBJKB_03463	0.83	-2.4
3,621,999	+		OHPLBJKB_03463	0.84	-0.0
3,621,999	+		OHPLBJKB_03463	0.84	-1.3
3,621,999	+		OHPLBJKB_03463	0.84	-1.7
3,622,000	-		OHPLBJKB_03463	0.84	-1.7
3,622,000	-		OHPLBJKB_03463	0.84	-0.9
3,622,055	-				+1.4
3,622,102	-				-0.7
3,622,102	-				+0.3
3,622,118	+				-1.1
3,622,119	-				+0.3
3,622,119	-				+0.2
3,622,123	-				-2.8
3,622,137	+				+0.9
3,622,143	-				-1.1
3,622,143	-				-0.3
3,622,241	+		OHPLBJKB_03464	0.12	-0.3
3,622,311	+		OHPLBJKB_03464	0.21	+0.6
3,622,311	+		OHPLBJKB_03464	0.21	-2.0
3,622,311	+		OHPLBJKB_03464	0.21	-0.4
3,622,311	+		OHPLBJKB_03464	0.21	+0.2
3,622,311	+		OHPLBJKB_03464	0.21	-0.9
3,622,311	+		OHPLBJKB_03464	0.21	-3.3
3,622,312	-		OHPLBJKB_03464	0.21	-1.0
3,622,312	-		OHPLBJKB_03464	0.21	+0.4
3,622,347	+		OHPLBJKB_03464	0.25	-1.1
3,622,347	+		OHPLBJKB_03464	0.25	-0.6
3,622,348	-		OHPLBJKB_03464	0.25	+1.4
3,622,444	-		OHPLBJKB_03464	0.37	-0.9