Strain Fitness in Escherichia coli ECRC62 around BNILDI_21285

Experiment: Control_ECRC62

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC62
4,277,065	-	mngB	BNILDI_21280	0.65	+0.3
4,277,082	+	mngB	BNILDI_21280	0.66	+1.5
4,277,134	+	mngB	BNILDI_21280	0.68	-1.7
4,277,134	+	mngB	BNILDI_21280	0.68	-0.0
4,277,135	-	mngB	BNILDI_21280	0.68	-0.1
4,277,135	-	mngB	BNILDI_21280	0.68	+1.4
4,277,135	-	mngB	BNILDI_21280	0.68	-0.1
4,277,142	+	mngB	BNILDI_21280	0.68	+0.4
4,277,142	+	mngB	BNILDI_21280	0.68	+0.1
4,277,142	+	mngB	BNILDI_21280	0.68	-0.6
4,277,143	-	mngB	BNILDI_21280	0.68	-0.0
4,277,145	-	mngB	BNILDI_21280	0.69	-1.1
4,277,145	-	mngB	BNILDI_21280	0.69	-1.3
4,277,145	-	mngB	BNILDI_21280	0.69	-2.6
4,277,212	+	mngB	BNILDI_21280	0.71	-0.5
4,277,212	+	mngB	BNILDI_21280	0.71	-2.6
4,277,213	-	mngB	BNILDI_21280	0.71	-1.4
4,277,213	-	mngB	BNILDI_21280	0.71	+1.0
4,277,213	-	mngB	BNILDI_21280	0.71	-1.8
4,277,241	+	mngB	BNILDI_21280	0.72	+1.9
4,277,241	+	mngB	BNILDI_21280	0.72	-3.3
4,277,241	+	mngB	BNILDI_21280	0.72	+0.0
4,277,242	-	mngB	BNILDI_21280	0.72	-0.6
4,277,252	+	mngB	BNILDI_21280	0.73	+0.3
4,277,269	-	mngB	BNILDI_21280	0.73	-0.2
4,277,414	+	mngB	BNILDI_21280	0.79	-1.0
4,277,415	-	mngB	BNILDI_21280	0.79	-0.9
4,277,415	-	mngB	BNILDI_21280	0.79	-0.3
4,277,419	-	mngB	BNILDI_21280	0.79	+0.4
4,277,562	-	mngB	BNILDI_21280	0.84	+0.0
4,277,562	-	mngB	BNILDI_21280	0.84	-1.2
4,277,603	-	mngB	BNILDI_21280	0.86	-0.3
4,277,606	+	mngB	BNILDI_21280	0.86	-1.5
4,277,606	+	mngB	BNILDI_21280	0.86	-0.1
4,277,606	+	mngB	BNILDI_21280	0.86	+0.3
4,277,607	-	mngB	BNILDI_21280	0.86	-2.3
4,277,607	-	mngB	BNILDI_21280	0.86	+1.1
4,277,611	+	mngB	BNILDI_21280	0.86	+1.8
4,277,612	-	mngB	BNILDI_21280	0.86	-0.3
4,277,744	-				-0.0
4,277,821	+				+0.2
4,277,822	-				-0.1
4,277,825	+				+1.6
4,277,826	-				-0.6
4,277,826	-				-0.4
4,277,828	+				-0.7
4,277,877	+				+1.2
4,278,016	+				-0.4
4,278,016	+				-0.3
4,278,017	-				-0.3
4,278,017	-				-1.7
4,278,017	-				-1.0
4,278,017	-				-1.0
4,278,221	+	mngA	BNILDI_21285	0.12	+0.8
4,278,294	-	mngA	BNILDI_21285	0.16	+0.8
4,278,306	+	mngA	BNILDI_21285	0.16	+0.9
4,278,513	-	mngA	BNILDI_21285	0.27	+1.5
4,278,513	-	mngA	BNILDI_21285	0.27	+0.2
4,278,645	-	mngA	BNILDI_21285	0.34	-0.1
4,278,664	+	mngA	BNILDI_21285	0.35	+0.5
4,278,665	-	mngA	BNILDI_21285	0.35	+0.5
4,278,689	+	mngA	BNILDI_21285	0.36	-0.7
4,278,730	+	mngA	BNILDI_21285	0.39	-0.3
4,278,842	-	mngA	BNILDI_21285	0.44	+2.2
4,278,848	+	mngA	BNILDI_21285	0.45	+1.5
4,278,851	-	mngA	BNILDI_21285	0.45	-0.8
4,278,907	+	mngA	BNILDI_21285	0.48	-1.9
4,278,969	+	mngA	BNILDI_21285	0.51	-0.2
4,278,970	-	mngA	BNILDI_21285	0.51	-1.3
4,279,093	-	mngA	BNILDI_21285	0.57	-0.0
4,279,093	-	mngA	BNILDI_21285	0.57	+0.4
4,279,199	+	mngA	BNILDI_21285	0.63	-0.3
4,279,241	+	mngA	BNILDI_21285	0.65	-0.6
4,279,242	-	mngA	BNILDI_21285	0.65	+0.0
4,279,257	-	mngA	BNILDI_21285	0.66	+0.6
4,279,370	-	mngA	BNILDI_21285	0.72	+1.7
4,279,370	-	mngA	BNILDI_21285	0.72	+0.4
4,279,413	-	mngA	BNILDI_21285	0.74	-1.8
4,279,503	+	mngA	BNILDI_21285	0.79	-1.6
4,279,504	-	mngA	BNILDI_21285	0.79	+0.1
4,279,562	+	mngA	BNILDI_21285	0.82	+0.7
4,279,568	+	mngA	BNILDI_21285	0.82	-0.4
4,279,569	-	mngA	BNILDI_21285	0.82	-0.8
4,279,569	-	mngA	BNILDI_21285	0.82	-0.7
4,279,608	+	mngA	BNILDI_21285	0.84	+2.9
4,279,732	-				+0.4
4,279,853	+				+0.7
4,280,069	-				-2.0
4,280,144	+				+0.3
4,280,277	+	mngR	BNILDI_21290	0.28	+0.1
4,280,278	-	mngR	BNILDI_21290	0.28	-0.1
4,280,301	+	mngR	BNILDI_21290	0.31	-0.2
4,280,357	+	mngR	BNILDI_21290	0.39	-1.2
4,280,377	+	mngR	BNILDI_21290	0.42	-0.2
4,280,419	+	mngR	BNILDI_21290	0.47	+1.2
4,280,419	+	mngR	BNILDI_21290	0.47	-2.1
4,280,654	+	mngR	BNILDI_21290	0.80	-1.1
4,280,655	-	mngR	BNILDI_21290	0.80	-1.1
4,280,655	-	mngR	BNILDI_21290	0.80	-0.5
4,280,655	-	mngR	BNILDI_21290	0.80	-0.8
4,280,657	+	mngR	BNILDI_21290	0.80	-0.5
4,280,727	+				+0.2
4,280,729	+				-1.3
4,280,759	+				-0.4
4,280,760	-				+0.4
4,280,817	+				-1.0
4,280,817	+				-0.5
4,280,884	-				-0.0
4,280,884	-				-1.7
4,280,899	+				-2.2
4,280,904	-				-0.2