Strain Fitness in Escherichia coli ECRC62 around BNILDI_18110

Experiment: Control_ECRC62

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC62
3,645,548	-	ynaI	BNILDI_18105	0.18	+0.0
3,645,551	+	ynaI	BNILDI_18105	0.18	+0.5
3,645,558	+	ynaI	BNILDI_18105	0.19	-1.2
3,645,946	+	ynaI	BNILDI_18105	0.56	-0.1
3,645,946	+	ynaI	BNILDI_18105	0.56	+2.9
3,646,007	+	ynaI	BNILDI_18105	0.62	-2.2
3,646,194	-	ynaI	BNILDI_18105	0.80	-1.0
3,646,358	+				+0.9
3,646,358	+				+0.6
3,646,359	-				+1.1
3,646,394	+				+0.7
3,646,463	+				+0.6
3,646,464	-				-0.1
3,646,464	-				+1.5
3,646,467	+				+0.8
3,646,500	+				+1.0
3,646,501	-				+1.1
3,646,546	-				-1.6
3,646,548	-				+0.6
3,646,740	+	mppA	BNILDI_18110	0.18	-0.3
3,647,050	-	mppA	BNILDI_18110	0.37	-0.4
3,647,110	+	mppA	BNILDI_18110	0.41	+0.3
3,647,110	+	mppA	BNILDI_18110	0.41	+0.2
3,647,123	-	mppA	BNILDI_18110	0.42	+1.5
3,647,123	-	mppA	BNILDI_18110	0.42	-0.1
3,647,181	-	mppA	BNILDI_18110	0.45	-1.4
3,647,243	+	mppA	BNILDI_18110	0.49	-2.1
3,647,244	-	mppA	BNILDI_18110	0.49	+0.5
3,647,244	-	mppA	BNILDI_18110	0.49	+0.4
3,647,291	+	mppA	BNILDI_18110	0.52	-1.4
3,647,408	-	mppA	BNILDI_18110	0.60	+0.3
3,647,426	+	mppA	BNILDI_18110	0.61	-1.8
3,647,426	+	mppA	BNILDI_18110	0.61	+0.1
3,647,427	-	mppA	BNILDI_18110	0.61	-0.9
3,647,427	-	mppA	BNILDI_18110	0.61	-1.0
3,647,427	-	mppA	BNILDI_18110	0.61	+0.1
3,647,480	-	mppA	BNILDI_18110	0.64	+1.0
3,647,480	-	mppA	BNILDI_18110	0.64	+0.3
3,647,608	-	mppA	BNILDI_18110	0.72	-0.1
3,647,785	-	mppA	BNILDI_18110	0.83	+0.7
3,647,938	-				-2.3
3,648,082	+				+2.1
3,648,095	+				+0.0
3,648,233	+				-0.5
3,648,249	-				-0.3
3,648,321	-				+0.4
3,648,413	+				-0.1
3,648,427	+				-0.7
3,648,429	+				-0.1
3,648,473	+				-2.0
3,648,541	-	pgrR	BNILDI_18115	0.16	-0.2
3,648,560	+	pgrR	BNILDI_18115	0.18	-0.6
3,648,560	+	pgrR	BNILDI_18115	0.18	+0.5
3,648,561	-	pgrR	BNILDI_18115	0.18	+1.7
3,648,565	+	pgrR	BNILDI_18115	0.19	+0.8
3,648,566	-	pgrR	BNILDI_18115	0.19	-0.4
3,648,626	-	pgrR	BNILDI_18115	0.25	-0.7
3,648,710	+	pgrR	BNILDI_18115	0.35	-1.8
3,648,718	-	pgrR	BNILDI_18115	0.36	-1.7
3,648,734	-	pgrR	BNILDI_18115	0.37	+0.5
3,648,795	+	pgrR	BNILDI_18115	0.44	-1.3
3,648,795	+	pgrR	BNILDI_18115	0.44	+0.9
3,648,806	-	pgrR	BNILDI_18115	0.45	-0.1
3,648,806	-	pgrR	BNILDI_18115	0.45	+2.6
3,648,808	-	pgrR	BNILDI_18115	0.46	-1.0
3,648,840	+	pgrR	BNILDI_18115	0.49	+1.6
3,648,999	+	pgrR	BNILDI_18115	0.67	+1.2
3,648,999	+	pgrR	BNILDI_18115	0.67	+1.1
3,649,000	-	pgrR	BNILDI_18115	0.67	+0.2
3,649,003	-	pgrR	BNILDI_18115	0.67	-1.1
3,649,005	+	pgrR	BNILDI_18115	0.68	-0.3
3,649,006	-	pgrR	BNILDI_18115	0.68	-1.2
3,649,006	-	pgrR	BNILDI_18115	0.68	-0.8
3,649,009	+	pgrR	BNILDI_18115	0.68	+0.3
3,649,009	+	pgrR	BNILDI_18115	0.68	-0.4
3,649,009	+	pgrR	BNILDI_18115	0.68	+0.2
3,649,010	-	pgrR	BNILDI_18115	0.68	+1.9