Experiment: Control_ECRC62
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ygfK and mocA are separated by 321 nucleotides mocA and yqeC are separated by 102 nucleotides yqeC and yqeB are separated by 47 nucleotides
BNILDI_10105: ygfK - putative selenate reductase subunit YgfK, at 2,032,563 to 2,035,661
ygfK
BNILDI_10110: mocA - molybdenum cofactor cytidylyltransferase, at 2,035,983 to 2,036,561
mocA
BNILDI_10115: yqeC - selenium cofactor biosynthesis protein YqeC, at 2,036,664 to 2,037,434
yqeC
BNILDI_10120: yqeB - selenium-dependent molybdenum cofactor biosynthesis protein YqeB, at 2,037,482 to 2,039,107
yqeB
Position (kb)
2035
2036
2037 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2035.074 kb on + strand, within ygfK at 2035.154 kb on + strand, within ygfK at 2035.155 kb on - strand, within ygfK at 2035.155 kb on - strand, within ygfK at 2035.191 kb on - strand, within ygfK at 2035.217 kb on + strand, within ygfK at 2035.217 kb on + strand, within ygfK at 2035.298 kb on - strand, within ygfK at 2035.457 kb on + strand at 2035.600 kb on + strand at 2035.611 kb on + strand at 2035.612 kb on - strand at 2035.649 kb on + strand at 2035.652 kb on + strand at 2035.652 kb on + strand at 2035.652 kb on + strand at 2035.653 kb on - strand at 2035.674 kb on - strand at 2035.679 kb on - strand at 2035.679 kb on - strand at 2035.680 kb on + strand at 2035.680 kb on + strand at 2035.681 kb on - strand at 2035.681 kb on - strand at 2035.686 kb on + strand at 2035.953 kb on + strand at 2036.013 kb on - strand at 2036.013 kb on - strand at 2036.015 kb on + strand at 2036.037 kb on - strand at 2036.325 kb on + strand, within mocA at 2036.358 kb on - strand, within mocA at 2036.358 kb on - strand, within mocA at 2036.543 kb on + strand at 2036.544 kb on - strand at 2036.577 kb on + strand at 2036.704 kb on + strand at 2036.704 kb on + strand at 2036.704 kb on + strand at 2036.812 kb on + strand, within yqeC at 2036.831 kb on + strand, within yqeC at 2036.831 kb on + strand, within yqeC at 2036.831 kb on + strand, within yqeC at 2036.831 kb on + strand, within yqeC at 2036.831 kb on + strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.832 kb on - strand, within yqeC at 2036.838 kb on - strand, within yqeC at 2036.903 kb on + strand, within yqeC at 2036.903 kb on + strand, within yqeC at 2036.904 kb on - strand, within yqeC at 2036.904 kb on - strand, within yqeC at 2036.904 kb on - strand, within yqeC at 2036.904 kb on - strand, within yqeC at 2036.966 kb on + strand, within yqeC at 2036.966 kb on + strand, within yqeC at 2036.966 kb on + strand, within yqeC at 2036.967 kb on - strand, within yqeC at 2036.967 kb on - strand, within yqeC at 2037.125 kb on + strand, within yqeC at 2037.125 kb on + strand, within yqeC at 2037.125 kb on + strand, within yqeC at 2037.126 kb on - strand, within yqeC at 2037.126 kb on - strand, within yqeC at 2037.394 kb on + strand at 2037.395 kb on - strand at 2037.395 kb on - strand at 2037.482 kb on - strand at 2037.487 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC62 remove 2,035,074 + ygfK BNILDI_10105 0.81 -0.1 2,035,154 + ygfK BNILDI_10105 0.84 +1.1 2,035,155 - ygfK BNILDI_10105 0.84 +0.7 2,035,155 - ygfK BNILDI_10105 0.84 +0.3 2,035,191 - ygfK BNILDI_10105 0.85 -1.6 2,035,217 + ygfK BNILDI_10105 0.86 -0.5 2,035,217 + ygfK BNILDI_10105 0.86 -0.5 2,035,298 - ygfK BNILDI_10105 0.88 -2.1 2,035,457 + +0.1 2,035,600 + +0.2 2,035,611 + +0.2 2,035,612 - +0.1 2,035,649 + -2.5 2,035,652 + -2.1 2,035,652 + +1.1 2,035,652 + -1.0 2,035,653 - -0.2 2,035,674 - -0.0 2,035,679 - -0.0 2,035,679 - -0.6 2,035,680 + -0.1 2,035,680 + -0.3 2,035,681 - +1.0 2,035,681 - -0.3 2,035,686 + +0.2 2,035,953 + -0.7 2,036,013 - -0.8 2,036,013 - -0.9 2,036,015 + +0.2 2,036,037 - +0.2 2,036,325 + mocA BNILDI_10110 0.59 -0.6 2,036,358 - mocA BNILDI_10110 0.65 -1.9 2,036,358 - mocA BNILDI_10110 0.65 -0.2 2,036,543 + -0.5 2,036,544 - -0.1 2,036,577 + -1.0 2,036,704 + +0.7 2,036,704 + +0.2 2,036,704 + +0.1 2,036,812 + yqeC BNILDI_10115 0.19 +0.9 2,036,831 + yqeC BNILDI_10115 0.22 +1.0 2,036,831 + yqeC BNILDI_10115 0.22 +0.2 2,036,831 + yqeC BNILDI_10115 0.22 +0.5 2,036,831 + yqeC BNILDI_10115 0.22 -0.5 2,036,831 + yqeC BNILDI_10115 0.22 +0.3 2,036,832 - yqeC BNILDI_10115 0.22 -2.2 2,036,832 - yqeC BNILDI_10115 0.22 -0.8 2,036,832 - yqeC BNILDI_10115 0.22 -2.8 2,036,832 - yqeC BNILDI_10115 0.22 -0.1 2,036,832 - yqeC BNILDI_10115 0.22 +0.5 2,036,832 - yqeC BNILDI_10115 0.22 +0.4 2,036,832 - yqeC BNILDI_10115 0.22 +0.1 2,036,838 - yqeC BNILDI_10115 0.23 -1.4 2,036,903 + yqeC BNILDI_10115 0.31 -2.4 2,036,903 + yqeC BNILDI_10115 0.31 +2.0 2,036,904 - yqeC BNILDI_10115 0.31 +1.3 2,036,904 - yqeC BNILDI_10115 0.31 -0.1 2,036,904 - yqeC BNILDI_10115 0.31 -2.1 2,036,904 - yqeC BNILDI_10115 0.31 -0.4 2,036,966 + yqeC BNILDI_10115 0.39 -2.7 2,036,966 + yqeC BNILDI_10115 0.39 -2.8 2,036,966 + yqeC BNILDI_10115 0.39 -0.4 2,036,967 - yqeC BNILDI_10115 0.39 +1.1 2,036,967 - yqeC BNILDI_10115 0.39 -0.8 2,037,125 + yqeC BNILDI_10115 0.60 +0.1 2,037,125 + yqeC BNILDI_10115 0.60 -0.9 2,037,125 + yqeC BNILDI_10115 0.60 +0.4 2,037,126 - yqeC BNILDI_10115 0.60 -1.4 2,037,126 - yqeC BNILDI_10115 0.60 -0.5 2,037,394 + -0.7 2,037,395 - +1.1 2,037,395 - +0.3 2,037,482 - +1.4 2,037,487 + -0.4
Or see this region's nucleotide sequence