Strain Fitness in Escherichia coli ECRC62 around BNILDI_05335

Experiment: Control_ECRC62

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC62
1,054,300	-	yihN	BNILDI_05330	0.43	+0.6
1,054,384	-	yihN	BNILDI_05330	0.50	+0.0
1,054,495	+	yihN	BNILDI_05330	0.59	+1.0
1,054,496	-	yihN	BNILDI_05330	0.59	-0.0
1,054,496	-	yihN	BNILDI_05330	0.59	-0.8
1,054,496	-	yihN	BNILDI_05330	0.59	-0.1
1,054,499	+	yihN	BNILDI_05330	0.59	-2.6
1,054,612	-	yihN	BNILDI_05330	0.68	-1.3
1,054,656	-	yihN	BNILDI_05330	0.71	-0.1
1,054,656	-	yihN	BNILDI_05330	0.71	+1.3
1,054,666	-	yihN	BNILDI_05330	0.72	-0.7
1,054,711	-	yihN	BNILDI_05330	0.76	-1.6
1,054,711	-	yihN	BNILDI_05330	0.76	-0.1
1,054,711	-	yihN	BNILDI_05330	0.76	-0.5
1,054,819	-	yihN	BNILDI_05330	0.84	-0.2
1,054,824	+	yihN	BNILDI_05330	0.85	-0.5
1,054,986	+				-0.2
1,055,117	+				-0.0
1,055,170	-				+0.3
1,055,313	+	ompL	BNILDI_05335	0.30	-1.8
1,055,315	+	ompL	BNILDI_05335	0.30	-0.5
1,055,709	+	ompL	BNILDI_05335	0.87	-0.6
1,055,711	+	ompL	BNILDI_05335	0.87	+0.1
1,055,803	-				+1.4
1,056,100	+	yihO	BNILDI_05340	0.17	-0.1
1,056,101	-	yihO	BNILDI_05340	0.17	-2.4
1,056,152	-	yihO	BNILDI_05340	0.20	-2.6
1,056,152	-	yihO	BNILDI_05340	0.20	-0.5
1,056,152	-	yihO	BNILDI_05340	0.20	+0.6
1,056,210	-	yihO	BNILDI_05340	0.24	-0.3
1,056,315	+	yihO	BNILDI_05340	0.32	+0.7
1,056,515	-	yihO	BNILDI_05340	0.46	+1.5
1,056,529	+	yihO	BNILDI_05340	0.47	-1.9
1,056,607	+	yihO	BNILDI_05340	0.53	-0.5
1,056,633	+	yihO	BNILDI_05340	0.55	-0.2
1,056,694	+	yihO	BNILDI_05340	0.59	+0.5
1,056,694	+	yihO	BNILDI_05340	0.59	+0.9
1,056,694	+	yihO	BNILDI_05340	0.59	-0.5
1,056,695	-	yihO	BNILDI_05340	0.59	-0.4
1,056,751	+	yihO	BNILDI_05340	0.63	-0.7
1,056,779	+	yihO	BNILDI_05340	0.65	+0.1