Experiment: Control_ECRC62
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yidZ and yieE are separated by 156 nucleotides yieE and yieF are separated by 21 nucleotides yieF and adeP are separated by 53 nucleotides
BNILDI_04430: yidZ - HTH-type transcriptional regulator YidZ, at 875,243 to 876,202
yidZ
BNILDI_04435: yieE - Uncharacterized protein YieE, at 876,359 to 877,108
yieE
BNILDI_04440: yieF - class I chromate reductase YieF, at 877,130 to 877,696
yieF
BNILDI_04445: adeP - adenine permease AdeP, at 877,750 to 879,087
adeP
Position (kb) 876
877
878 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 875.362 kb on + strand, within yidZ at 875.379 kb on + strand, within yidZ at 875.579 kb on - strand, within yidZ at 875.600 kb on + strand, within yidZ at 875.600 kb on + strand, within yidZ at 875.601 kb on - strand, within yidZ at 875.601 kb on - strand, within yidZ at 875.601 kb on - strand, within yidZ at 875.632 kb on - strand, within yidZ at 875.655 kb on + strand, within yidZ at 875.656 kb on - strand, within yidZ at 875.665 kb on + strand, within yidZ at 875.730 kb on + strand, within yidZ at 875.908 kb on - strand, within yidZ at 875.971 kb on + strand, within yidZ at 876.027 kb on - strand, within yidZ at 876.029 kb on + strand, within yidZ at 876.030 kb on - strand, within yidZ at 876.030 kb on - strand, within yidZ at 876.030 kb on - strand, within yidZ at 876.112 kb on + strand at 876.143 kb on - strand at 876.211 kb on + strand at 876.289 kb on + strand at 876.290 kb on - strand at 876.290 kb on - strand at 876.317 kb on + strand at 876.317 kb on + strand at 876.318 kb on - strand at 876.318 kb on - strand at 876.325 kb on + strand at 876.325 kb on + strand at 876.326 kb on - strand at 876.331 kb on + strand at 876.342 kb on + strand at 876.387 kb on + strand at 876.562 kb on + strand, within yieE at 876.619 kb on + strand, within yieE at 876.619 kb on + strand, within yieE at 876.619 kb on + strand, within yieE at 876.672 kb on + strand, within yieE at 876.672 kb on + strand, within yieE at 876.697 kb on + strand, within yieE at 876.769 kb on + strand, within yieE at 876.770 kb on - strand, within yieE at 876.897 kb on + strand, within yieE at 876.897 kb on + strand, within yieE at 876.897 kb on + strand, within yieE at 876.897 kb on + strand, within yieE at 876.898 kb on - strand, within yieE at 876.906 kb on + strand, within yieE at 876.906 kb on + strand, within yieE at 876.906 kb on + strand, within yieE at 876.907 kb on - strand, within yieE at 876.990 kb on + strand, within yieE at 876.991 kb on - strand, within yieE at 876.991 kb on - strand, within yieE at 877.110 kb on - strand at 877.153 kb on + strand at 877.154 kb on - strand at 877.159 kb on - strand at 877.186 kb on + strand at 877.186 kb on + strand at 877.186 kb on + strand at 877.204 kb on + strand, within yieF at 877.249 kb on - strand, within yieF at 877.274 kb on + strand, within yieF at 877.275 kb on - strand, within yieF at 877.318 kb on - strand, within yieF at 877.376 kb on + strand, within yieF at 877.378 kb on + strand, within yieF at 877.378 kb on + strand, within yieF at 877.379 kb on - strand, within yieF at 877.379 kb on - strand, within yieF at 877.379 kb on - strand, within yieF at 877.379 kb on - strand, within yieF at 877.382 kb on + strand, within yieF at 877.382 kb on + strand, within yieF at 877.382 kb on + strand, within yieF at 877.383 kb on - strand, within yieF at 877.383 kb on - strand, within yieF at 877.383 kb on - strand, within yieF at 877.383 kb on - strand, within yieF at 877.383 kb on - strand, within yieF at 877.856 kb on + strand at 877.944 kb on + strand, within adeP at 877.997 kb on + strand, within adeP at 878.021 kb on + strand, within adeP
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC62 remove 875,362 + yidZ BNILDI_04430 0.12 +0.8 875,379 + yidZ BNILDI_04430 0.14 +1.3 875,579 - yidZ BNILDI_04430 0.35 +0.4 875,600 + yidZ BNILDI_04430 0.37 +0.1 875,600 + yidZ BNILDI_04430 0.37 +0.5 875,601 - yidZ BNILDI_04430 0.37 +1.4 875,601 - yidZ BNILDI_04430 0.37 +0.2 875,601 - yidZ BNILDI_04430 0.37 -0.6 875,632 - yidZ BNILDI_04430 0.41 -0.8 875,655 + yidZ BNILDI_04430 0.43 -2.8 875,656 - yidZ BNILDI_04430 0.43 -0.5 875,665 + yidZ BNILDI_04430 0.44 +0.8 875,730 + yidZ BNILDI_04430 0.51 +0.1 875,908 - yidZ BNILDI_04430 0.69 +1.1 875,971 + yidZ BNILDI_04430 0.76 -2.1 876,027 - yidZ BNILDI_04430 0.82 +0.4 876,029 + yidZ BNILDI_04430 0.82 -1.0 876,030 - yidZ BNILDI_04430 0.82 +0.3 876,030 - yidZ BNILDI_04430 0.82 -0.0 876,030 - yidZ BNILDI_04430 0.82 +0.7 876,112 + -0.3 876,143 - -0.9 876,211 + -0.3 876,289 + -0.3 876,290 - -0.0 876,290 - -1.3 876,317 + -0.5 876,317 + +0.2 876,318 - -0.7 876,318 - -1.1 876,325 + -1.3 876,325 + -1.0 876,326 - -0.4 876,331 + -0.1 876,342 + +0.7 876,387 + -1.8 876,562 + yieE BNILDI_04435 0.27 +0.1 876,619 + yieE BNILDI_04435 0.35 +0.4 876,619 + yieE BNILDI_04435 0.35 -1.3 876,619 + yieE BNILDI_04435 0.35 -0.3 876,672 + yieE BNILDI_04435 0.42 -1.3 876,672 + yieE BNILDI_04435 0.42 +0.7 876,697 + yieE BNILDI_04435 0.45 -0.1 876,769 + yieE BNILDI_04435 0.55 -0.0 876,770 - yieE BNILDI_04435 0.55 +0.4 876,897 + yieE BNILDI_04435 0.72 +0.6 876,897 + yieE BNILDI_04435 0.72 -0.9 876,897 + yieE BNILDI_04435 0.72 +2.4 876,897 + yieE BNILDI_04435 0.72 +1.4 876,898 - yieE BNILDI_04435 0.72 -2.0 876,906 + yieE BNILDI_04435 0.73 -0.3 876,906 + yieE BNILDI_04435 0.73 -0.0 876,906 + yieE BNILDI_04435 0.73 -0.1 876,907 - yieE BNILDI_04435 0.73 +0.4 876,990 + yieE BNILDI_04435 0.84 -1.0 876,991 - yieE BNILDI_04435 0.84 -0.7 876,991 - yieE BNILDI_04435 0.84 +0.5 877,110 - +1.4 877,153 + -0.5 877,154 - -0.4 877,159 - -0.8 877,186 + -1.8 877,186 + -2.3 877,186 + +0.1 877,204 + yieF BNILDI_04440 0.13 -3.3 877,249 - yieF BNILDI_04440 0.21 -0.1 877,274 + yieF BNILDI_04440 0.25 -0.4 877,275 - yieF BNILDI_04440 0.26 -0.3 877,318 - yieF BNILDI_04440 0.33 +1.1 877,376 + yieF BNILDI_04440 0.43 +0.3 877,378 + yieF BNILDI_04440 0.44 -0.6 877,378 + yieF BNILDI_04440 0.44 +1.1 877,379 - yieF BNILDI_04440 0.44 -0.3 877,379 - yieF BNILDI_04440 0.44 -2.0 877,379 - yieF BNILDI_04440 0.44 -1.0 877,379 - yieF BNILDI_04440 0.44 +0.5 877,382 + yieF BNILDI_04440 0.44 -3.4 877,382 + yieF BNILDI_04440 0.44 +0.6 877,382 + yieF BNILDI_04440 0.44 +0.4 877,383 - yieF BNILDI_04440 0.45 +2.0 877,383 - yieF BNILDI_04440 0.45 -0.4 877,383 - yieF BNILDI_04440 0.45 +0.4 877,383 - yieF BNILDI_04440 0.45 -0.1 877,383 - yieF BNILDI_04440 0.45 -1.2 877,856 + -1.7 877,944 + adeP BNILDI_04445 0.14 +0.2 877,997 + adeP BNILDI_04445 0.18 +1.4 878,021 + adeP BNILDI_04445 0.20 +2.6
Or see this region's nucleotide sequence