Strain Fitness in Escherichia coli ECRC62 around BNILDI_21800

Experiment: Bas05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas05
4,380,973	+				-1.0
4,380,974	-				+0.3
4,380,976	-				+1.6
4,381,042	-				+0.4
4,381,091	+				+1.2
4,381,091	+				+0.0
4,381,229	+	tatE	BNILDI_21795	0.18	+1.1
4,381,229	+	tatE	BNILDI_21795	0.18	-0.3
4,381,230	-	tatE	BNILDI_21795	0.18	+0.6
4,381,230	-	tatE	BNILDI_21795	0.18	+1.0
4,381,230	-	tatE	BNILDI_21795	0.18	+1.3
4,381,230	-	tatE	BNILDI_21795	0.18	-0.0
4,381,282	+	tatE	BNILDI_21795	0.25	-0.9
4,381,283	-	tatE	BNILDI_21795	0.25	-1.8
4,381,283	-	tatE	BNILDI_21795	0.25	-0.4
4,381,283	-	tatE	BNILDI_21795	0.25	-2.5
4,381,285	-	tatE	BNILDI_21795	0.25	-1.2
4,381,285	-	tatE	BNILDI_21795	0.25	-0.7
4,381,285	-	tatE	BNILDI_21795	0.25	+0.0
4,381,285	-	tatE	BNILDI_21795	0.25	+0.6
4,381,425	-	tatE	BNILDI_21795	0.43	-0.4
4,381,533	+	tatE	BNILDI_21795	0.57	+0.4
4,381,534	-	tatE	BNILDI_21795	0.57	-1.0
4,381,534	-	tatE	BNILDI_21795	0.57	+2.1
4,381,658	-	tatE	BNILDI_21795	0.73	-0.2
4,381,712	-	tatE	BNILDI_21795	0.79	-0.1
4,381,931	+				+0.6
4,381,932	-				+0.1
4,381,941	-				-0.5
4,381,971	-				+1.1
4,381,982	+				+0.2
4,382,030	+	crcB	BNILDI_21800	0.17	-0.2
4,382,108	+	crcB	BNILDI_21800	0.37	-0.6
4,382,166	-	crcB	BNILDI_21800	0.52	+0.1
4,382,168	+	crcB	BNILDI_21800	0.53	-1.7
4,382,196	-	crcB	BNILDI_21800	0.60	-1.1
4,382,238	-	crcB	BNILDI_21800	0.71	+0.0
4,382,348	-				-0.0
4,382,521	-	cspE	BNILDI_21805	0.56	-0.4
4,382,589	-	cspE	BNILDI_21805	0.89	+0.1
4,382,601	-				-0.4
4,382,607	-				-0.6
4,382,625	+				+0.3
4,382,833	+				+1.2
4,382,833	+				-0.9
4,382,833	+				-1.7
4,382,833	+				-0.7
4,382,834	-				-0.0
4,382,834	-				-1.2
4,382,848	+	pagP	BNILDI_21810	0.11	+0.7
4,382,918	-	pagP	BNILDI_21810	0.23	-1.3
4,382,918	-	pagP	BNILDI_21810	0.23	-0.0
4,383,050	+	pagP	BNILDI_21810	0.47	-1.1
4,383,050	+	pagP	BNILDI_21810	0.47	+0.1
4,383,065	-	pagP	BNILDI_21810	0.50	-0.7
4,383,199	-	pagP	BNILDI_21810	0.73	-0.6
4,383,206	-	pagP	BNILDI_21810	0.75	+1.9