Strain Fitness in Escherichia coli ECRC62 around BNILDI_21495

Experiment: Bas05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas05
4,325,557	-	pgm	BNILDI_21485	0.85	+0.3
4,325,721	+				-1.6
4,325,721	+				+2.3
4,325,827	+				-1.9
4,326,076	+	seqA	BNILDI_21490	0.46	-1.1
4,326,078	+	seqA	BNILDI_21490	0.46	-0.7
4,326,131	-	seqA	BNILDI_21490	0.56	+3.5
4,326,279	-	seqA	BNILDI_21490	0.83	-1.9
4,326,279	-	seqA	BNILDI_21490	0.83	-0.8
4,326,334	+				-2.0
4,326,334	+				-1.6
4,326,335	-				-1.4
4,326,400	+				-0.0
4,326,401	-				-0.9
4,326,417	-				+0.1
4,326,417	-				-0.4
4,326,418	+				-0.4
4,326,418	+				-1.9
4,326,418	+				-0.7
4,326,425	-				-0.0
4,326,483	-				-0.6
4,326,516	+				-0.1
4,326,517	-				-0.7
4,326,517	-				-0.2
4,326,517	-				-0.4
4,326,519	+				+3.3
4,326,520	-				+0.3
4,326,688	-	ybfF	BNILDI_21495	0.17	-1.1
4,326,703	-	ybfF	BNILDI_21495	0.19	-0.8
4,326,775	-	ybfF	BNILDI_21495	0.29	-1.6
4,326,849	+	ybfF	BNILDI_21495	0.38	-2.7
4,326,849	+	ybfF	BNILDI_21495	0.38	-1.3
4,326,917	+	ybfF	BNILDI_21495	0.47	+0.3
4,326,918	-	ybfF	BNILDI_21495	0.47	-0.3
4,326,918	-	ybfF	BNILDI_21495	0.47	+0.1
4,327,015	-	ybfF	BNILDI_21495	0.60	-0.5
4,327,107	+	ybfF	BNILDI_21495	0.72	-1.0
4,327,108	-	ybfF	BNILDI_21495	0.72	-1.1
4,327,177	+	ybfF	BNILDI_21495	0.81	-0.5
4,327,287	-				+0.2
4,327,394	+				-0.0
4,327,394	+				-0.6
4,327,394	+				-1.0
4,327,394	+				+0.1
4,327,395	-				+0.9
4,327,395	-				+0.1
4,327,491	+	ybfE	BNILDI_21500	0.28	-0.6
4,327,491	+	ybfE	BNILDI_21500	0.28	+0.7
4,327,492	-	ybfE	BNILDI_21500	0.28	+1.2
4,327,565	-	ybfE	BNILDI_21500	0.48	-0.5
4,327,599	+	ybfE	BNILDI_21500	0.57	-0.3
4,327,599	+	ybfE	BNILDI_21500	0.57	+0.3
4,327,600	-	ybfE	BNILDI_21500	0.58	+1.0
4,327,600	-	ybfE	BNILDI_21500	0.58	-2.3
4,327,678	+	ybfE	BNILDI_21500	0.79	+0.0
4,327,735	+				-0.5
4,327,770	-				-0.9