Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_20090 and BNILDI_20095 overlap by 11 nucleotides BNILDI_20095 and BNILDI_20100 are separated by 13 nucleotides
BNILDI_20090: BNILDI_20090 - capsular biosynthesis protein, at 4,033,337 to 4,034,722
_20090
BNILDI_20095: BNILDI_20095 - glycosyl transferase, at 4,034,712 to 4,035,701
_20095
BNILDI_20100: BNILDI_20100 - glycosyltransferase family 1 protein, at 4,035,715 to 4,036,926
_20100
Position (kb) 4034
4035
4036 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4033.742 kb on + strand, within BNILDI_20090 at 4033.742 kb on + strand, within BNILDI_20090 at 4033.743 kb on - strand, within BNILDI_20090 at 4033.743 kb on - strand, within BNILDI_20090 at 4033.750 kb on - strand, within BNILDI_20090 at 4033.750 kb on - strand, within BNILDI_20090 at 4033.879 kb on - strand, within BNILDI_20090 at 4033.907 kb on - strand, within BNILDI_20090 at 4034.064 kb on + strand, within BNILDI_20090 at 4034.113 kb on + strand, within BNILDI_20090 at 4034.303 kb on - strand, within BNILDI_20090 at 4034.303 kb on - strand, within BNILDI_20090 at 4034.653 kb on - strand at 4034.819 kb on + strand, within BNILDI_20095 at 4034.952 kb on + strand, within BNILDI_20095 at 4034.967 kb on + strand, within BNILDI_20095 at 4034.968 kb on - strand, within BNILDI_20095 at 4035.051 kb on + strand, within BNILDI_20095 at 4035.096 kb on + strand, within BNILDI_20095 at 4035.104 kb on + strand, within BNILDI_20095 at 4035.105 kb on - strand, within BNILDI_20095 at 4035.161 kb on - strand, within BNILDI_20095 at 4035.234 kb on + strand, within BNILDI_20095 at 4035.277 kb on - strand, within BNILDI_20095 at 4035.279 kb on - strand, within BNILDI_20095 at 4035.303 kb on + strand, within BNILDI_20095 at 4035.315 kb on - strand, within BNILDI_20095 at 4035.395 kb on - strand, within BNILDI_20095 at 4035.732 kb on + strand at 4036.017 kb on + strand, within BNILDI_20100 at 4036.018 kb on - strand, within BNILDI_20100 at 4036.047 kb on + strand, within BNILDI_20100 at 4036.047 kb on + strand, within BNILDI_20100 at 4036.096 kb on + strand, within BNILDI_20100 at 4036.264 kb on + strand, within BNILDI_20100 at 4036.316 kb on + strand, within BNILDI_20100 at 4036.316 kb on + strand, within BNILDI_20100 at 4036.414 kb on + strand, within BNILDI_20100 at 4036.414 kb on + strand, within BNILDI_20100 at 4036.415 kb on - strand, within BNILDI_20100 at 4036.569 kb on - strand, within BNILDI_20100 at 4036.587 kb on + strand, within BNILDI_20100 at 4036.599 kb on + strand, within BNILDI_20100
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 4,033,742 + BNILDI_20090 0.29 -1.2 4,033,742 + BNILDI_20090 0.29 +0.9 4,033,743 - BNILDI_20090 0.29 -0.4 4,033,743 - BNILDI_20090 0.29 +0.1 4,033,750 - BNILDI_20090 0.30 -1.3 4,033,750 - BNILDI_20090 0.30 +0.7 4,033,879 - BNILDI_20090 0.39 -1.1 4,033,907 - BNILDI_20090 0.41 +1.0 4,034,064 + BNILDI_20090 0.52 -0.5 4,034,113 + BNILDI_20090 0.56 -1.1 4,034,303 - BNILDI_20090 0.70 +0.5 4,034,303 - BNILDI_20090 0.70 -0.2 4,034,653 - -0.2 4,034,819 + BNILDI_20095 0.11 +2.3 4,034,952 + BNILDI_20095 0.24 +2.5 4,034,967 + BNILDI_20095 0.26 +0.1 4,034,968 - BNILDI_20095 0.26 +0.1 4,035,051 + BNILDI_20095 0.34 -1.5 4,035,096 + BNILDI_20095 0.39 +0.0 4,035,104 + BNILDI_20095 0.40 -1.1 4,035,105 - BNILDI_20095 0.40 -2.7 4,035,161 - BNILDI_20095 0.45 -0.5 4,035,234 + BNILDI_20095 0.53 +0.6 4,035,277 - BNILDI_20095 0.57 -0.1 4,035,279 - BNILDI_20095 0.57 -0.8 4,035,303 + BNILDI_20095 0.60 -0.2 4,035,315 - BNILDI_20095 0.61 +0.3 4,035,395 - BNILDI_20095 0.69 +1.0 4,035,732 + -0.4 4,036,017 + BNILDI_20100 0.25 +0.1 4,036,018 - BNILDI_20100 0.25 +1.1 4,036,047 + BNILDI_20100 0.27 -0.6 4,036,047 + BNILDI_20100 0.27 -0.8 4,036,096 + BNILDI_20100 0.31 +0.4 4,036,264 + BNILDI_20100 0.45 -2.5 4,036,316 + BNILDI_20100 0.50 +0.4 4,036,316 + BNILDI_20100 0.50 -1.3 4,036,414 + BNILDI_20100 0.58 -0.6 4,036,414 + BNILDI_20100 0.58 -0.1 4,036,415 - BNILDI_20100 0.58 +0.5 4,036,569 - BNILDI_20100 0.70 +0.0 4,036,587 + BNILDI_20100 0.72 -0.4 4,036,599 + BNILDI_20100 0.73 +2.3
Or see this region's nucleotide sequence