Strain Fitness in Escherichia coli ECRC62 around BNILDI_19980

Experiment: Bas05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas05
4,008,448	-	rmf	BNILDI_19975	0.71	+0.4
4,008,544	+				-1.3
4,008,547	+				+0.1
4,008,584	+				-0.6
4,008,750	-				+0.2
4,008,753	+				+0.2
4,008,754	-				-1.7
4,008,767	+				-1.1
4,009,126	-	pqiC	BNILDI_19980	0.66	-0.0
4,009,150	-	pqiC	BNILDI_19980	0.71	-1.0
4,009,150	-	pqiC	BNILDI_19980	0.71	-1.4
4,009,233	-	pqiC	BNILDI_19980	0.85	-0.4
4,009,242	+	pqiC	BNILDI_19980	0.87	-0.6
4,009,460	+				-1.0
4,009,461	-				-0.2
4,009,461	-				-0.7
4,009,750	-	pqiB	BNILDI_19985	0.27	+0.5
4,009,750	-	pqiB	BNILDI_19985	0.27	-0.3
4,009,750	-	pqiB	BNILDI_19985	0.27	-0.7
4,009,806	-	pqiB	BNILDI_19985	0.30	-1.2
4,009,950	+	pqiB	BNILDI_19985	0.39	-0.3
4,009,966	-	pqiB	BNILDI_19985	0.40	-0.8