Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_14320 and BNILDI_14325 are separated by 6 nucleotides BNILDI_14325 and BNILDI_14330 overlap by 4 nucleotides
BNILDI_14320: BNILDI_14320 - Hydroxyethylthiazole kinase, at 2,891,113 to 2,891,499
_14320
BNILDI_14325: BNILDI_14325 - Hydroxyethylthiazole kinase, at 2,891,506 to 2,891,901
_14325
BNILDI_14330: BNILDI_14330 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 2,891,898 to 2,892,698
_14330
Position (kb)
2891
2892 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2890.114 kb on - strand at 2890.117 kb on - strand at 2890.201 kb on + strand at 2890.395 kb on - strand at 2890.459 kb on - strand at 2890.460 kb on + strand at 2890.460 kb on + strand at 2890.461 kb on - strand at 2890.605 kb on - strand at 2890.662 kb on - strand at 2890.662 kb on - strand at 2890.665 kb on + strand at 2890.665 kb on + strand at 2890.665 kb on + strand at 2890.665 kb on + strand at 2890.665 kb on + strand at 2890.665 kb on + strand at 2890.666 kb on - strand at 2890.666 kb on - strand at 2890.673 kb on + strand at 2890.811 kb on + strand at 2890.812 kb on - strand at 2891.024 kb on - strand at 2891.030 kb on - strand at 2891.113 kb on - strand at 2891.113 kb on - strand at 2891.113 kb on - strand at 2891.113 kb on - strand at 2891.221 kb on - strand, within BNILDI_14320 at 2891.320 kb on - strand, within BNILDI_14320 at 2891.638 kb on + strand, within BNILDI_14325 at 2891.638 kb on + strand, within BNILDI_14325 at 2891.638 kb on + strand, within BNILDI_14325 at 2891.761 kb on - strand, within BNILDI_14325 at 2892.009 kb on - strand, within BNILDI_14330 at 2892.134 kb on + strand, within BNILDI_14330 at 2892.219 kb on - strand, within BNILDI_14330 at 2892.266 kb on + strand, within BNILDI_14330
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 2,890,114 - -0.5 2,890,117 - -0.3 2,890,201 + -0.1 2,890,395 - -1.5 2,890,459 - -0.1 2,890,460 + -2.1 2,890,460 + -0.7 2,890,461 - -0.8 2,890,605 - +1.3 2,890,662 - +1.1 2,890,662 - +0.6 2,890,665 + -1.1 2,890,665 + +0.4 2,890,665 + +0.6 2,890,665 + -0.8 2,890,665 + -0.4 2,890,665 + +0.3 2,890,666 - +0.1 2,890,666 - +2.7 2,890,673 + +0.6 2,890,811 + +1.5 2,890,812 - -0.3 2,891,024 - +0.5 2,891,030 - -0.1 2,891,113 - -0.3 2,891,113 - -1.1 2,891,113 - +1.0 2,891,113 - +1.6 2,891,221 - BNILDI_14320 0.28 -0.9 2,891,320 - BNILDI_14320 0.53 -0.9 2,891,638 + BNILDI_14325 0.33 +0.3 2,891,638 + BNILDI_14325 0.33 +0.7 2,891,638 + BNILDI_14325 0.33 -0.3 2,891,761 - BNILDI_14325 0.64 -0.4 2,892,009 - BNILDI_14330 0.14 -0.4 2,892,134 + BNILDI_14330 0.29 -0.5 2,892,219 - BNILDI_14330 0.40 -0.4 2,892,266 + BNILDI_14330 0.46 +0.9
Or see this region's nucleotide sequence