Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_13045 and BNILDI_13050 are separated by 62 nucleotides BNILDI_13050 and gtrB overlap by 4 nucleotides gtrB and BNILDI_13060 overlap by 4 nucleotides
BNILDI_13045: BNILDI_13045 - Bifunctional tail protein, at 2,612,140 to 2,614,380
_13045
BNILDI_13050: BNILDI_13050 - Glucosyl transferase GtrII, at 2,614,443 to 2,615,873
_13050
BNILDI_13055: gtrB - bactoprenol glucosyl transferase, at 2,615,870 to 2,616,787
gtrB
BNILDI_13060: BNILDI_13060 - bactoprenol glucosyl transferase, at 2,616,784 to 2,617,146
_13060
Position (kb)
2614
2615
2616 Strain fitness (log2 ratio)
-1
0
1
2 at 2613.495 kb on + strand, within BNILDI_13045 at 2613.708 kb on - strand, within BNILDI_13045 at 2613.710 kb on - strand, within BNILDI_13045 at 2614.006 kb on - strand, within BNILDI_13045 at 2614.023 kb on + strand, within BNILDI_13045 at 2614.059 kb on + strand, within BNILDI_13045 at 2614.118 kb on + strand, within BNILDI_13045 at 2614.479 kb on + strand at 2614.603 kb on - strand, within BNILDI_13050 at 2615.528 kb on - strand, within BNILDI_13050 at 2615.559 kb on + strand, within BNILDI_13050 at 2615.656 kb on - strand, within BNILDI_13050 at 2615.805 kb on + strand at 2615.919 kb on + strand at 2615.924 kb on - strand at 2616.080 kb on + strand, within gtrB at 2616.081 kb on - strand, within gtrB at 2616.280 kb on + strand, within gtrB at 2616.357 kb on - strand, within gtrB at 2616.357 kb on - strand, within gtrB at 2616.374 kb on - strand, within gtrB at 2616.375 kb on + strand, within gtrB at 2616.376 kb on - strand, within gtrB at 2616.376 kb on - strand, within gtrB at 2616.376 kb on - strand, within gtrB at 2616.446 kb on - strand, within gtrB at 2616.574 kb on + strand, within gtrB at 2616.608 kb on + strand, within gtrB at 2616.628 kb on + strand, within gtrB at 2616.637 kb on + strand, within gtrB at 2616.637 kb on + strand, within gtrB at 2616.694 kb on - strand, within gtrB at 2616.720 kb on - strand at 2616.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 2,613,495 + BNILDI_13045 0.60 +0.9 2,613,708 - BNILDI_13045 0.70 -1.3 2,613,710 - BNILDI_13045 0.70 +0.1 2,614,006 - BNILDI_13045 0.83 +0.7 2,614,023 + BNILDI_13045 0.84 -0.1 2,614,059 + BNILDI_13045 0.86 +1.8 2,614,118 + BNILDI_13045 0.88 -1.0 2,614,479 + -0.4 2,614,603 - BNILDI_13050 0.11 -0.5 2,615,528 - BNILDI_13050 0.76 -0.2 2,615,559 + BNILDI_13050 0.78 -1.5 2,615,656 - BNILDI_13050 0.85 -1.0 2,615,805 + -0.3 2,615,919 + -0.5 2,615,924 - -1.4 2,616,080 + gtrB BNILDI_13055 0.23 -0.7 2,616,081 - gtrB BNILDI_13055 0.23 -1.7 2,616,280 + gtrB BNILDI_13055 0.45 -0.3 2,616,357 - gtrB BNILDI_13055 0.53 -0.6 2,616,357 - gtrB BNILDI_13055 0.53 +0.2 2,616,374 - gtrB BNILDI_13055 0.55 -0.8 2,616,375 + gtrB BNILDI_13055 0.55 +0.0 2,616,376 - gtrB BNILDI_13055 0.55 -0.3 2,616,376 - gtrB BNILDI_13055 0.55 -1.3 2,616,376 - gtrB BNILDI_13055 0.55 -0.5 2,616,446 - gtrB BNILDI_13055 0.63 -1.3 2,616,574 + gtrB BNILDI_13055 0.77 +0.0 2,616,608 + gtrB BNILDI_13055 0.80 -1.3 2,616,628 + gtrB BNILDI_13055 0.83 -0.7 2,616,637 + gtrB BNILDI_13055 0.84 -1.3 2,616,637 + gtrB BNILDI_13055 0.84 -0.6 2,616,694 - gtrB BNILDI_13055 0.90 +0.9 2,616,720 - -1.7 2,616,780 - -0.8
Or see this region's nucleotide sequence