Strain Fitness in Escherichia coli ECRC62 around BNILDI_11075

Experiment: Bas05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas05
2,238,007	-	srlR	BNILDI_11065	0.56	-0.9
2,238,082	-	srlR	BNILDI_11065	0.66	-0.2
2,238,188	+	srlR	BNILDI_11065	0.80	-0.7
2,238,263	+	srlR	BNILDI_11065	0.89	-0.3
2,238,264	-	srlR	BNILDI_11065	0.89	-1.4
2,238,292	-				-1.1
2,238,395	+				-0.8
2,238,443	-				+1.3
2,238,458	-	gutM	BNILDI_11070	0.13	+0.2
2,238,490	+	gutM	BNILDI_11070	0.22	+0.2
2,238,561	+	gutM	BNILDI_11070	0.41	-0.6
2,238,562	-	gutM	BNILDI_11070	0.42	+1.8
2,238,625	-	gutM	BNILDI_11070	0.59	+1.1
2,238,670	+	gutM	BNILDI_11070	0.72	-0.5
2,238,670	+	gutM	BNILDI_11070	0.72	+0.1
2,238,670	+	gutM	BNILDI_11070	0.72	-0.2
2,238,671	-	gutM	BNILDI_11070	0.72	-0.7
2,238,671	-	gutM	BNILDI_11070	0.72	-1.2
2,238,671	-	gutM	BNILDI_11070	0.72	+0.1
2,238,690	+	gutM	BNILDI_11070	0.77	+1.3
2,238,772	-				+0.0
2,238,788	-				-1.2
2,238,805	-				-0.6
2,238,836	+				-0.1
2,238,837	-				+0.3
2,238,839	-				+1.7
2,238,925	+				+0.1
2,238,959	+	srlD	BNILDI_11075	0.11	-0.9
2,238,960	-	srlD	BNILDI_11075	0.11	+1.2
2,239,012	+	srlD	BNILDI_11075	0.17	+1.2
2,239,012	+	srlD	BNILDI_11075	0.17	+0.0
2,239,012	+	srlD	BNILDI_11075	0.17	-0.0
2,239,013	-	srlD	BNILDI_11075	0.18	+1.1
2,239,016	-	srlD	BNILDI_11075	0.18	+1.9
2,239,310	-	srlD	BNILDI_11075	0.56	+0.5
2,239,330	-	srlD	BNILDI_11075	0.58	+0.1
2,239,383	+	srlD	BNILDI_11075	0.65	+0.6
2,239,432	-	srlD	BNILDI_11075	0.71	+0.8
2,239,508	-	srlD	BNILDI_11075	0.81	+0.6
2,239,858	-	srlB	BNILDI_11080	0.53	-0.1
2,240,023	-				-0.4
2,240,044	-				-0.8
2,240,100	-				+0.3
2,240,225	+	srlE	BNILDI_11085	0.19	+0.7
2,240,226	-	srlE	BNILDI_11085	0.19	+2.7
2,240,428	+	srlE	BNILDI_11085	0.40	-0.7
2,240,484	-	srlE	BNILDI_11085	0.46	+0.4
2,240,561	+	srlE	BNILDI_11085	0.54	+1.3
2,240,602	-	srlE	BNILDI_11085	0.58	+0.7