Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mraZ and rsmH are separated by 1 nucleotides rsmH and BNILDI_08595 overlap by 4 nucleotides BNILDI_08595 and ftsI are separated by 15 nucleotides
BNILDI_08585: mraZ - division/cell wall cluster transcriptional repressor MraZ, at 1,718,842 to 1,719,300
mraZ
BNILDI_08590: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 1,719,302 to 1,720,243
rsmH
BNILDI_08595: BNILDI_08595 - penicillin-binding protein PBP3 FtsI, at 1,720,240 to 1,720,605
_08595
BNILDI_08600: ftsI - peptidoglycan glycosyltransferase FtsI, at 1,720,621 to 1,722,387
ftsI
Position (kb)
1719
1720
1721 Strain fitness (log2 ratio)
-2
-1
0
1 at 1718.319 kb on + strand at 1718.320 kb on - strand at 1718.324 kb on - strand at 1718.324 kb on - strand at 1718.339 kb on + strand at 1718.342 kb on + strand at 1718.348 kb on + strand at 1718.349 kb on - strand at 1718.440 kb on + strand at 1718.550 kb on + strand at 1718.551 kb on - strand at 1718.551 kb on - strand at 1718.589 kb on + strand at 1718.591 kb on + strand at 1718.659 kb on - strand at 1718.694 kb on - strand at 1718.715 kb on - strand at 1719.068 kb on + strand, within mraZ at 1719.068 kb on + strand, within mraZ at 1719.074 kb on + strand, within mraZ at 1719.682 kb on + strand, within rsmH at 1719.886 kb on + strand, within rsmH at 1720.057 kb on + strand, within rsmH at 1720.057 kb on + strand, within rsmH at 1720.603 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 1,718,319 + -1.1 1,718,320 - -0.2 1,718,324 - -0.1 1,718,324 - -0.3 1,718,339 + +0.0 1,718,342 + -0.8 1,718,348 + -0.5 1,718,349 - +0.5 1,718,440 + +1.7 1,718,550 + -0.7 1,718,551 - -0.4 1,718,551 - -0.2 1,718,589 + -0.4 1,718,591 + +0.9 1,718,659 - -0.3 1,718,694 - +0.4 1,718,715 - -0.4 1,719,068 + mraZ BNILDI_08585 0.49 -0.6 1,719,068 + mraZ BNILDI_08585 0.49 -0.6 1,719,074 + mraZ BNILDI_08585 0.51 +0.4 1,719,682 + rsmH BNILDI_08590 0.40 -2.6 1,719,886 + rsmH BNILDI_08590 0.62 -0.6 1,720,057 + rsmH BNILDI_08590 0.80 +0.3 1,720,057 + rsmH BNILDI_08590 0.80 -0.7 1,720,603 + -0.1
Or see this region's nucleotide sequence