Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hslO and yhgE are separated by 134 nucleotides yhgE and pckA are separated by 378 nucleotides
BNILDI_02675: hslO - Hsp33 family molecular chaperone HslO, at 506,511 to 507,389
hslO
BNILDI_02680: yhgE - Uncharacterized protein YhgE, at 507,524 to 509,248
yhgE
BNILDI_02685: pckA - phosphoenolpyruvate carboxykinase (ATP), at 509,627 to 511,249
pckA
Position (kb) 507
508
509
510 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 506.883 kb on + strand, within hslO at 506.976 kb on - strand, within hslO at 506.992 kb on + strand, within hslO at 506.992 kb on + strand, within hslO at 507.018 kb on - strand, within hslO at 507.031 kb on + strand, within hslO at 507.318 kb on + strand at 507.394 kb on + strand at 507.394 kb on + strand at 507.395 kb on - strand at 507.395 kb on - strand at 507.432 kb on + strand at 507.529 kb on + strand at 507.530 kb on - strand at 507.530 kb on - strand at 507.530 kb on - strand at 507.530 kb on - strand at 507.530 kb on - strand at 507.533 kb on + strand at 507.533 kb on + strand at 507.534 kb on - strand at 507.560 kb on + strand at 507.560 kb on + strand at 507.560 kb on + strand at 507.561 kb on - strand at 507.561 kb on - strand at 507.561 kb on - strand at 507.654 kb on - strand at 507.662 kb on - strand at 507.702 kb on + strand, within yhgE at 507.702 kb on + strand, within yhgE at 507.725 kb on - strand, within yhgE at 507.725 kb on - strand, within yhgE at 507.760 kb on + strand, within yhgE at 507.881 kb on + strand, within yhgE at 507.881 kb on + strand, within yhgE at 507.900 kb on - strand, within yhgE at 507.941 kb on + strand, within yhgE at 507.941 kb on + strand, within yhgE at 508.048 kb on + strand, within yhgE at 508.050 kb on + strand, within yhgE at 508.050 kb on + strand, within yhgE at 508.051 kb on - strand, within yhgE at 508.051 kb on - strand, within yhgE at 508.099 kb on + strand, within yhgE at 508.117 kb on + strand, within yhgE at 508.118 kb on - strand, within yhgE at 508.123 kb on + strand, within yhgE at 508.124 kb on - strand, within yhgE at 508.145 kb on - strand, within yhgE at 508.157 kb on + strand, within yhgE at 508.225 kb on + strand, within yhgE at 508.362 kb on + strand, within yhgE at 508.362 kb on + strand, within yhgE at 508.362 kb on + strand, within yhgE at 508.362 kb on + strand, within yhgE at 508.362 kb on + strand, within yhgE at 508.363 kb on - strand, within yhgE at 508.574 kb on + strand, within yhgE at 508.575 kb on - strand, within yhgE at 508.577 kb on + strand, within yhgE at 508.578 kb on - strand, within yhgE at 508.622 kb on - strand, within yhgE at 508.682 kb on + strand, within yhgE at 508.682 kb on + strand, within yhgE at 508.683 kb on - strand, within yhgE at 508.683 kb on - strand, within yhgE at 508.683 kb on - strand, within yhgE at 508.683 kb on - strand, within yhgE at 508.687 kb on + strand, within yhgE at 508.687 kb on + strand, within yhgE at 508.687 kb on + strand, within yhgE at 508.688 kb on - strand, within yhgE at 508.688 kb on - strand, within yhgE at 508.688 kb on - strand, within yhgE at 508.688 kb on - strand, within yhgE at 508.692 kb on + strand, within yhgE at 508.693 kb on - strand, within yhgE at 508.693 kb on - strand, within yhgE at 508.696 kb on + strand, within yhgE at 508.696 kb on + strand, within yhgE at 508.697 kb on - strand, within yhgE at 508.769 kb on + strand, within yhgE at 508.933 kb on - strand, within yhgE at 508.998 kb on - strand, within yhgE at 509.026 kb on + strand, within yhgE at 509.173 kb on - strand at 509.251 kb on + strand at 509.251 kb on + strand at 509.252 kb on - strand at 509.300 kb on + strand at 509.300 kb on + strand at 509.300 kb on + strand at 509.300 kb on + strand at 509.352 kb on - strand at 509.421 kb on - strand at 509.544 kb on + strand at 509.550 kb on + strand at 509.551 kb on - strand at 509.588 kb on + strand at 509.602 kb on + strand at 509.602 kb on + strand at 509.602 kb on + strand at 509.603 kb on - strand at 509.603 kb on - strand at 509.603 kb on - strand at 509.603 kb on - strand at 509.603 kb on - strand at 509.607 kb on - strand at 509.614 kb on - strand at 509.669 kb on + strand at 509.670 kb on - strand at 509.685 kb on + strand at 509.685 kb on + strand at 509.685 kb on + strand at 509.686 kb on - strand at 509.686 kb on - strand at 509.686 kb on - strand at 509.686 kb on - strand at 509.686 kb on - strand at 509.686 kb on - strand at 509.772 kb on + strand at 509.772 kb on + strand at 509.772 kb on + strand at 509.773 kb on - strand at 509.776 kb on + strand at 509.833 kb on + strand, within pckA at 509.834 kb on - strand, within pckA at 509.837 kb on + strand, within pckA at 509.837 kb on + strand, within pckA at 509.838 kb on - strand, within pckA at 509.838 kb on - strand, within pckA at 509.838 kb on - strand, within pckA at 509.838 kb on - strand, within pckA at 509.840 kb on - strand, within pckA at 509.897 kb on - strand, within pckA at 509.942 kb on - strand, within pckA at 510.083 kb on - strand, within pckA at 510.205 kb on + strand, within pckA at 510.246 kb on - strand, within pckA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 506,883 + hslO BNILDI_02675 0.42 -0.7 506,976 - hslO BNILDI_02675 0.53 +0.3 506,992 + hslO BNILDI_02675 0.55 -0.7 506,992 + hslO BNILDI_02675 0.55 -0.4 507,018 - hslO BNILDI_02675 0.58 +0.1 507,031 + hslO BNILDI_02675 0.59 -1.7 507,318 + -0.0 507,394 + -0.4 507,394 + -2.6 507,395 - +0.4 507,395 - -0.2 507,432 + -0.2 507,529 + +0.3 507,530 - -1.2 507,530 - -0.4 507,530 - -1.0 507,530 - -0.0 507,530 - -0.6 507,533 + -0.4 507,533 + -0.1 507,534 - +0.0 507,560 + -0.4 507,560 + -0.6 507,560 + -1.4 507,561 - -0.7 507,561 - -1.4 507,561 - -0.3 507,654 - +0.2 507,662 - -2.3 507,702 + yhgE BNILDI_02680 0.10 -0.0 507,702 + yhgE BNILDI_02680 0.10 +1.4 507,725 - yhgE BNILDI_02680 0.12 -0.7 507,725 - yhgE BNILDI_02680 0.12 +0.4 507,760 + yhgE BNILDI_02680 0.14 -1.5 507,881 + yhgE BNILDI_02680 0.21 -0.0 507,881 + yhgE BNILDI_02680 0.21 -0.2 507,900 - yhgE BNILDI_02680 0.22 +0.0 507,941 + yhgE BNILDI_02680 0.24 -0.2 507,941 + yhgE BNILDI_02680 0.24 -0.1 508,048 + yhgE BNILDI_02680 0.30 -0.7 508,050 + yhgE BNILDI_02680 0.30 -1.2 508,050 + yhgE BNILDI_02680 0.30 -0.5 508,051 - yhgE BNILDI_02680 0.31 -0.5 508,051 - yhgE BNILDI_02680 0.31 -2.0 508,099 + yhgE BNILDI_02680 0.33 +0.4 508,117 + yhgE BNILDI_02680 0.34 -0.1 508,118 - yhgE BNILDI_02680 0.34 -0.9 508,123 + yhgE BNILDI_02680 0.35 -0.8 508,124 - yhgE BNILDI_02680 0.35 -0.5 508,145 - yhgE BNILDI_02680 0.36 +1.7 508,157 + yhgE BNILDI_02680 0.37 +1.0 508,225 + yhgE BNILDI_02680 0.41 -0.6 508,362 + yhgE BNILDI_02680 0.49 -0.4 508,362 + yhgE BNILDI_02680 0.49 +0.7 508,362 + yhgE BNILDI_02680 0.49 +0.1 508,362 + yhgE BNILDI_02680 0.49 +0.7 508,362 + yhgE BNILDI_02680 0.49 -0.1 508,363 - yhgE BNILDI_02680 0.49 +1.2 508,574 + yhgE BNILDI_02680 0.61 +0.4 508,575 - yhgE BNILDI_02680 0.61 -0.7 508,577 + yhgE BNILDI_02680 0.61 +0.0 508,578 - yhgE BNILDI_02680 0.61 +0.6 508,622 - yhgE BNILDI_02680 0.64 +1.0 508,682 + yhgE BNILDI_02680 0.67 -3.2 508,682 + yhgE BNILDI_02680 0.67 +0.7 508,683 - yhgE BNILDI_02680 0.67 -0.6 508,683 - yhgE BNILDI_02680 0.67 +3.2 508,683 - yhgE BNILDI_02680 0.67 +0.6 508,683 - yhgE BNILDI_02680 0.67 -0.5 508,687 + yhgE BNILDI_02680 0.67 +0.1 508,687 + yhgE BNILDI_02680 0.67 +0.5 508,687 + yhgE BNILDI_02680 0.67 +0.3 508,688 - yhgE BNILDI_02680 0.67 +1.1 508,688 - yhgE BNILDI_02680 0.67 +0.7 508,688 - yhgE BNILDI_02680 0.67 +0.5 508,688 - yhgE BNILDI_02680 0.67 -0.5 508,692 + yhgE BNILDI_02680 0.68 +0.3 508,693 - yhgE BNILDI_02680 0.68 +1.0 508,693 - yhgE BNILDI_02680 0.68 -0.3 508,696 + yhgE BNILDI_02680 0.68 -0.7 508,696 + yhgE BNILDI_02680 0.68 +0.1 508,697 - yhgE BNILDI_02680 0.68 -0.5 508,769 + yhgE BNILDI_02680 0.72 +0.2 508,933 - yhgE BNILDI_02680 0.82 +0.0 508,998 - yhgE BNILDI_02680 0.85 -0.0 509,026 + yhgE BNILDI_02680 0.87 -0.5 509,173 - +0.9 509,251 + +0.7 509,251 + +0.8 509,252 - +0.4 509,300 + -0.1 509,300 + -0.5 509,300 + +0.8 509,300 + -2.0 509,352 - +0.1 509,421 - -1.2 509,544 + +0.3 509,550 + +0.3 509,551 - -0.1 509,588 + -1.7 509,602 + -0.8 509,602 + -0.3 509,602 + +0.1 509,603 - -0.9 509,603 - +0.9 509,603 - +0.5 509,603 - +1.2 509,603 - -0.1 509,607 - -0.3 509,614 - +0.7 509,669 + -1.7 509,670 - +0.1 509,685 + +0.2 509,685 + +0.0 509,685 + -1.1 509,686 - -0.1 509,686 - -0.2 509,686 - -0.7 509,686 - -0.4 509,686 - +2.4 509,686 - +0.5 509,772 + +1.4 509,772 + -0.6 509,772 + -1.2 509,773 - -0.6 509,776 + -0.4 509,833 + pckA BNILDI_02685 0.13 +0.9 509,834 - pckA BNILDI_02685 0.13 -1.3 509,837 + pckA BNILDI_02685 0.13 -0.0 509,837 + pckA BNILDI_02685 0.13 -0.2 509,838 - pckA BNILDI_02685 0.13 -1.1 509,838 - pckA BNILDI_02685 0.13 +0.2 509,838 - pckA BNILDI_02685 0.13 +0.2 509,838 - pckA BNILDI_02685 0.13 -0.1 509,840 - pckA BNILDI_02685 0.13 +1.8 509,897 - pckA BNILDI_02685 0.17 -0.2 509,942 - pckA BNILDI_02685 0.19 +0.7 510,083 - pckA BNILDI_02685 0.28 +0.1 510,205 + pckA BNILDI_02685 0.36 +2.1 510,246 - pckA BNILDI_02685 0.38 -0.9
Or see this region's nucleotide sequence