Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt kefB and kefG overlap by 1 nucleotides kefG and yheS are separated by 130 nucleotides yheS and yheT overlap by 1 nucleotides
BNILDI_02445: kefB - glutathione-regulated potassium-efflux system protein KefB, at 460,773 to 462,578
kefB
BNILDI_02450: kefG - glutathione-regulated potassium-efflux system ancillary protein KefG, at 462,578 to 463,129
kefG
BNILDI_02455: yheS - ABC transporter ATP-binding protein, at 463,260 to 465,173
yheS
BNILDI_02460: yheT - hydrolase, at 465,173 to 466,195
yheT
Position (kb) 463
464
465
466 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 462.265 kb on - strand, within kefB at 462.288 kb on + strand, within kefB at 462.384 kb on + strand, within kefB at 462.432 kb on - strand at 462.677 kb on - strand, within kefG at 462.677 kb on - strand, within kefG at 462.677 kb on - strand, within kefG at 462.802 kb on + strand, within kefG at 462.811 kb on + strand, within kefG at 462.869 kb on + strand, within kefG at 462.869 kb on + strand, within kefG at 462.869 kb on + strand, within kefG at 462.870 kb on - strand, within kefG at 462.910 kb on + strand, within kefG at 462.911 kb on - strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.912 kb on + strand, within kefG at 462.913 kb on - strand, within kefG at 462.913 kb on - strand, within kefG at 462.913 kb on - strand, within kefG at 462.913 kb on - strand, within kefG at 462.916 kb on + strand, within kefG at 462.916 kb on + strand, within kefG at 462.917 kb on - strand, within kefG at 462.919 kb on - strand, within kefG at 462.979 kb on + strand, within kefG at 463.052 kb on - strand, within kefG at 463.098 kb on + strand at 463.098 kb on + strand at 463.098 kb on + strand at 463.099 kb on - strand at 463.099 kb on - strand at 463.158 kb on - strand at 463.160 kb on - strand at 463.160 kb on - strand at 463.259 kb on + strand at 463.259 kb on + strand at 463.259 kb on + strand at 463.260 kb on - strand at 463.260 kb on - strand at 463.377 kb on - strand at 463.382 kb on + strand at 463.506 kb on + strand, within yheS at 463.506 kb on + strand, within yheS at 463.506 kb on + strand, within yheS at 463.507 kb on - strand, within yheS at 463.541 kb on - strand, within yheS at 463.553 kb on - strand, within yheS at 463.572 kb on - strand, within yheS at 463.616 kb on + strand, within yheS at 463.616 kb on + strand, within yheS at 463.631 kb on + strand, within yheS at 463.632 kb on - strand, within yheS at 463.733 kb on + strand, within yheS at 463.733 kb on + strand, within yheS at 463.842 kb on + strand, within yheS at 463.901 kb on + strand, within yheS at 463.950 kb on + strand, within yheS at 463.950 kb on + strand, within yheS at 463.951 kb on - strand, within yheS at 463.951 kb on - strand, within yheS at 463.966 kb on + strand, within yheS at 463.967 kb on - strand, within yheS at 464.004 kb on + strand, within yheS at 464.005 kb on - strand, within yheS at 464.043 kb on + strand, within yheS at 464.044 kb on - strand, within yheS at 464.044 kb on - strand, within yheS at 464.044 kb on - strand, within yheS at 464.046 kb on - strand, within yheS at 464.046 kb on - strand, within yheS at 464.099 kb on + strand, within yheS at 464.099 kb on + strand, within yheS at 464.394 kb on + strand, within yheS at 464.441 kb on + strand, within yheS at 464.441 kb on + strand, within yheS at 464.442 kb on - strand, within yheS at 464.442 kb on - strand, within yheS at 464.442 kb on - strand, within yheS at 464.530 kb on + strand, within yheS at 464.530 kb on + strand, within yheS at 464.587 kb on + strand, within yheS at 464.587 kb on + strand, within yheS at 464.587 kb on + strand, within yheS at 464.588 kb on - strand, within yheS at 464.588 kb on - strand, within yheS at 464.634 kb on - strand, within yheS at 464.768 kb on + strand, within yheS at 464.768 kb on + strand, within yheS at 464.769 kb on - strand, within yheS at 464.889 kb on - strand, within yheS at 465.030 kb on + strand at 465.030 kb on + strand at 465.259 kb on - strand at 465.265 kb on + strand at 465.266 kb on - strand at 465.266 kb on - strand at 465.266 kb on - strand at 465.266 kb on - strand at 465.266 kb on - strand at 465.385 kb on + strand, within yheT at 465.385 kb on + strand, within yheT at 465.396 kb on + strand, within yheT at 465.396 kb on + strand, within yheT at 465.431 kb on - strand, within yheT at 465.526 kb on + strand, within yheT at 465.527 kb on - strand, within yheT at 465.539 kb on + strand, within yheT at 465.540 kb on - strand, within yheT at 465.540 kb on - strand, within yheT at 465.540 kb on - strand, within yheT at 465.643 kb on + strand, within yheT at 465.644 kb on - strand, within yheT at 465.733 kb on + strand, within yheT at 465.734 kb on - strand, within yheT at 465.734 kb on - strand, within yheT at 465.737 kb on + strand, within yheT at 465.738 kb on - strand, within yheT at 465.738 kb on - strand, within yheT at 465.738 kb on - strand, within yheT at 465.743 kb on - strand, within yheT at 465.776 kb on + strand, within yheT at 465.777 kb on - strand, within yheT at 465.859 kb on - strand, within yheT at 465.935 kb on + strand, within yheT at 465.950 kb on - strand, within yheT at 465.950 kb on - strand, within yheT at 466.019 kb on - strand, within yheT at 466.119 kb on + strand at 466.119 kb on + strand at 466.119 kb on + strand at 466.119 kb on + strand at 466.120 kb on - strand at 466.120 kb on - strand at 466.120 kb on - strand at 466.120 kb on - strand at 466.120 kb on - strand at 466.120 kb on - strand at 466.172 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 462,265 - kefB BNILDI_02445 0.83 -0.8 462,288 + kefB BNILDI_02445 0.84 -1.1 462,384 + kefB BNILDI_02445 0.89 +0.0 462,432 - -0.6 462,677 - kefG BNILDI_02450 0.18 +0.1 462,677 - kefG BNILDI_02450 0.18 -0.2 462,677 - kefG BNILDI_02450 0.18 +0.4 462,802 + kefG BNILDI_02450 0.41 -0.1 462,811 + kefG BNILDI_02450 0.42 +1.4 462,869 + kefG BNILDI_02450 0.53 -0.4 462,869 + kefG BNILDI_02450 0.53 +1.5 462,869 + kefG BNILDI_02450 0.53 -0.2 462,870 - kefG BNILDI_02450 0.53 +3.2 462,910 + kefG BNILDI_02450 0.60 +0.1 462,911 - kefG BNILDI_02450 0.60 -1.2 462,912 + kefG BNILDI_02450 0.61 -0.5 462,912 + kefG BNILDI_02450 0.61 +0.3 462,912 + kefG BNILDI_02450 0.61 -1.1 462,912 + kefG BNILDI_02450 0.61 +0.5 462,912 + kefG BNILDI_02450 0.61 +1.7 462,912 + kefG BNILDI_02450 0.61 +0.2 462,912 + kefG BNILDI_02450 0.61 -0.3 462,913 - kefG BNILDI_02450 0.61 -0.3 462,913 - kefG BNILDI_02450 0.61 -0.6 462,913 - kefG BNILDI_02450 0.61 -1.0 462,913 - kefG BNILDI_02450 0.61 -0.2 462,916 + kefG BNILDI_02450 0.61 -0.1 462,916 + kefG BNILDI_02450 0.61 -1.4 462,917 - kefG BNILDI_02450 0.61 -0.4 462,919 - kefG BNILDI_02450 0.62 -0.1 462,979 + kefG BNILDI_02450 0.73 -1.1 463,052 - kefG BNILDI_02450 0.86 +0.7 463,098 + -0.6 463,098 + +1.2 463,098 + +3.4 463,099 - -0.3 463,099 - -0.7 463,158 - -0.7 463,160 - -0.3 463,160 - -0.0 463,259 + -0.1 463,259 + +0.7 463,259 + +0.1 463,260 - +0.5 463,260 - +0.1 463,377 - -0.6 463,382 + -0.0 463,506 + yheS BNILDI_02455 0.13 -1.5 463,506 + yheS BNILDI_02455 0.13 -0.9 463,506 + yheS BNILDI_02455 0.13 -1.1 463,507 - yheS BNILDI_02455 0.13 -0.6 463,541 - yheS BNILDI_02455 0.15 -1.4 463,553 - yheS BNILDI_02455 0.15 -0.9 463,572 - yheS BNILDI_02455 0.16 -0.2 463,616 + yheS BNILDI_02455 0.19 -0.4 463,616 + yheS BNILDI_02455 0.19 -0.3 463,631 + yheS BNILDI_02455 0.19 +0.1 463,632 - yheS BNILDI_02455 0.19 -0.5 463,733 + yheS BNILDI_02455 0.25 -0.5 463,733 + yheS BNILDI_02455 0.25 +1.1 463,842 + yheS BNILDI_02455 0.30 +0.6 463,901 + yheS BNILDI_02455 0.33 -0.2 463,950 + yheS BNILDI_02455 0.36 +0.2 463,950 + yheS BNILDI_02455 0.36 +0.5 463,951 - yheS BNILDI_02455 0.36 +0.9 463,951 - yheS BNILDI_02455 0.36 -0.5 463,966 + yheS BNILDI_02455 0.37 +1.6 463,967 - yheS BNILDI_02455 0.37 -0.1 464,004 + yheS BNILDI_02455 0.39 +0.4 464,005 - yheS BNILDI_02455 0.39 -0.5 464,043 + yheS BNILDI_02455 0.41 -0.6 464,044 - yheS BNILDI_02455 0.41 +0.3 464,044 - yheS BNILDI_02455 0.41 -0.3 464,044 - yheS BNILDI_02455 0.41 -0.2 464,046 - yheS BNILDI_02455 0.41 +0.3 464,046 - yheS BNILDI_02455 0.41 -0.2 464,099 + yheS BNILDI_02455 0.44 +0.3 464,099 + yheS BNILDI_02455 0.44 +0.4 464,394 + yheS BNILDI_02455 0.59 -0.6 464,441 + yheS BNILDI_02455 0.62 -3.0 464,441 + yheS BNILDI_02455 0.62 +0.5 464,442 - yheS BNILDI_02455 0.62 +0.5 464,442 - yheS BNILDI_02455 0.62 +0.7 464,442 - yheS BNILDI_02455 0.62 +0.3 464,530 + yheS BNILDI_02455 0.66 -0.9 464,530 + yheS BNILDI_02455 0.66 +1.1 464,587 + yheS BNILDI_02455 0.69 +1.6 464,587 + yheS BNILDI_02455 0.69 -0.4 464,587 + yheS BNILDI_02455 0.69 +0.4 464,588 - yheS BNILDI_02455 0.69 -2.8 464,588 - yheS BNILDI_02455 0.69 +1.4 464,634 - yheS BNILDI_02455 0.72 -0.9 464,768 + yheS BNILDI_02455 0.79 -0.1 464,768 + yheS BNILDI_02455 0.79 -0.4 464,769 - yheS BNILDI_02455 0.79 +4.0 464,889 - yheS BNILDI_02455 0.85 -0.7 465,030 + +0.4 465,030 + -0.5 465,259 - +0.0 465,265 + -0.8 465,266 - -0.5 465,266 - -0.6 465,266 - -0.6 465,266 - +0.6 465,266 - -0.7 465,385 + yheT BNILDI_02460 0.21 +0.1 465,385 + yheT BNILDI_02460 0.21 +0.5 465,396 + yheT BNILDI_02460 0.22 -1.2 465,396 + yheT BNILDI_02460 0.22 +0.2 465,431 - yheT BNILDI_02460 0.25 -1.2 465,526 + yheT BNILDI_02460 0.35 +0.7 465,527 - yheT BNILDI_02460 0.35 +0.1 465,539 + yheT BNILDI_02460 0.36 +0.4 465,540 - yheT BNILDI_02460 0.36 +1.9 465,540 - yheT BNILDI_02460 0.36 -0.3 465,540 - yheT BNILDI_02460 0.36 +0.1 465,643 + yheT BNILDI_02460 0.46 -0.9 465,644 - yheT BNILDI_02460 0.46 -0.4 465,733 + yheT BNILDI_02460 0.55 -0.1 465,734 - yheT BNILDI_02460 0.55 -1.8 465,734 - yheT BNILDI_02460 0.55 -0.1 465,737 + yheT BNILDI_02460 0.55 -1.6 465,738 - yheT BNILDI_02460 0.55 +0.6 465,738 - yheT BNILDI_02460 0.55 +0.1 465,738 - yheT BNILDI_02460 0.55 -0.2 465,743 - yheT BNILDI_02460 0.56 +0.8 465,776 + yheT BNILDI_02460 0.59 -0.3 465,777 - yheT BNILDI_02460 0.59 +2.7 465,859 - yheT BNILDI_02460 0.67 +2.1 465,935 + yheT BNILDI_02460 0.74 -0.5 465,950 - yheT BNILDI_02460 0.76 -1.6 465,950 - yheT BNILDI_02460 0.76 -0.4 466,019 - yheT BNILDI_02460 0.83 -0.3 466,119 + +0.6 466,119 + +0.6 466,119 + +0.3 466,119 + +1.6 466,120 - +0.4 466,120 - -0.7 466,120 - +1.9 466,120 - +0.1 466,120 - +0.1 466,120 - -1.6 466,172 + +0.2
Or see this region's nucleotide sequence