Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mtgA and elbB overlap by 4 nucleotides elbB and arcB are separated by 229 nucleotides arcB and yhcC are separated by 95 nucleotides
BNILDI_01825: mtgA - monofunctional biosynthetic peptidoglycan transglycosylase, at 353,455 to 354,183
mtgA
BNILDI_01830: elbB - isoprenoid biosynthesis glyoxalase ElbB, at 354,180 to 354,833
elbB
BNILDI_01840: arcB - aerobic respiration two-component sensor histidine kinase ArcB, at 355,063 to 357,399
arcB
BNILDI_01845: yhcC - TIGR01212 family radical SAM protein, at 357,495 to 358,424
yhcC
Position (kb) 355
356
357
358 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 354.156 kb on + strand at 354.157 kb on - strand at 354.216 kb on - strand at 354.257 kb on + strand, within elbB at 354.257 kb on + strand, within elbB at 354.257 kb on + strand, within elbB at 354.257 kb on + strand, within elbB at 354.258 kb on - strand, within elbB at 354.258 kb on - strand, within elbB at 354.258 kb on - strand, within elbB at 354.258 kb on - strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.259 kb on + strand, within elbB at 354.260 kb on - strand, within elbB at 354.260 kb on - strand, within elbB at 354.260 kb on - strand, within elbB at 354.281 kb on + strand, within elbB at 354.428 kb on + strand, within elbB at 354.428 kb on + strand, within elbB at 354.429 kb on - strand, within elbB at 354.483 kb on + strand, within elbB at 354.625 kb on - strand, within elbB at 354.679 kb on - strand, within elbB at 354.679 kb on - strand, within elbB at 354.753 kb on + strand, within elbB at 354.754 kb on - strand, within elbB at 354.817 kb on - strand at 354.905 kb on - strand at 354.940 kb on - strand at 354.983 kb on - strand at 354.983 kb on - strand at 354.993 kb on - strand at 354.993 kb on - strand at 355.105 kb on + strand at 355.106 kb on - strand at 355.106 kb on - strand at 355.156 kb on - strand at 355.156 kb on - strand at 355.314 kb on - strand, within arcB at 355.369 kb on + strand, within arcB at 355.518 kb on + strand, within arcB at 355.656 kb on + strand, within arcB at 355.657 kb on - strand, within arcB at 355.903 kb on - strand, within arcB at 355.932 kb on + strand, within arcB at 356.039 kb on + strand, within arcB at 356.039 kb on + strand, within arcB at 356.039 kb on + strand, within arcB at 356.039 kb on + strand, within arcB at 356.040 kb on - strand, within arcB at 356.388 kb on + strand, within arcB at 356.482 kb on - strand, within arcB at 356.930 kb on - strand, within arcB at 357.076 kb on + strand, within arcB at 357.188 kb on + strand at 357.189 kb on - strand at 357.234 kb on + strand at 357.287 kb on - strand at 357.368 kb on + strand at 357.368 kb on + strand at 357.368 kb on + strand at 357.369 kb on - strand at 357.369 kb on - strand at 357.369 kb on - strand at 357.369 kb on - strand at 357.451 kb on + strand at 357.451 kb on + strand at 357.452 kb on - strand at 357.452 kb on - strand at 357.458 kb on + strand at 357.459 kb on - strand at 357.541 kb on - strand at 357.672 kb on - strand, within yhcC at 357.704 kb on - strand, within yhcC at 357.756 kb on - strand, within yhcC at 357.774 kb on - strand, within yhcC at 357.774 kb on - strand, within yhcC at 357.793 kb on - strand, within yhcC at 357.793 kb on - strand, within yhcC at 357.874 kb on - strand, within yhcC at 357.874 kb on - strand, within yhcC at 357.874 kb on - strand, within yhcC at 357.874 kb on - strand, within yhcC at 357.874 kb on - strand, within yhcC at 357.920 kb on + strand, within yhcC at 357.921 kb on - strand, within yhcC at 357.987 kb on + strand, within yhcC at 358.026 kb on - strand, within yhcC at 358.097 kb on + strand, within yhcC at 358.123 kb on + strand, within yhcC at 358.124 kb on - strand, within yhcC at 358.127 kb on + strand, within yhcC at 358.163 kb on + strand, within yhcC at 358.186 kb on + strand, within yhcC at 358.280 kb on + strand, within yhcC at 358.311 kb on - strand, within yhcC at 358.355 kb on + strand at 358.356 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 354,156 + +0.5 354,157 - +0.2 354,216 - -0.0 354,257 + elbB BNILDI_01830 0.12 -0.8 354,257 + elbB BNILDI_01830 0.12 -0.5 354,257 + elbB BNILDI_01830 0.12 -2.0 354,257 + elbB BNILDI_01830 0.12 -0.2 354,258 - elbB BNILDI_01830 0.12 -0.8 354,258 - elbB BNILDI_01830 0.12 -0.5 354,258 - elbB BNILDI_01830 0.12 -0.2 354,258 - elbB BNILDI_01830 0.12 +0.8 354,259 + elbB BNILDI_01830 0.12 -0.3 354,259 + elbB BNILDI_01830 0.12 +0.6 354,259 + elbB BNILDI_01830 0.12 -0.2 354,259 + elbB BNILDI_01830 0.12 +0.2 354,259 + elbB BNILDI_01830 0.12 -0.7 354,259 + elbB BNILDI_01830 0.12 +2.6 354,259 + elbB BNILDI_01830 0.12 -1.2 354,260 - elbB BNILDI_01830 0.12 -0.4 354,260 - elbB BNILDI_01830 0.12 +0.3 354,260 - elbB BNILDI_01830 0.12 +2.8 354,281 + elbB BNILDI_01830 0.15 -0.4 354,428 + elbB BNILDI_01830 0.38 -0.8 354,428 + elbB BNILDI_01830 0.38 -0.6 354,429 - elbB BNILDI_01830 0.38 -0.1 354,483 + elbB BNILDI_01830 0.46 -0.5 354,625 - elbB BNILDI_01830 0.68 +1.0 354,679 - elbB BNILDI_01830 0.76 -0.8 354,679 - elbB BNILDI_01830 0.76 +0.2 354,753 + elbB BNILDI_01830 0.88 -0.2 354,754 - elbB BNILDI_01830 0.88 -1.6 354,817 - +0.7 354,905 - +0.1 354,940 - -0.6 354,983 - +0.6 354,983 - +0.9 354,993 - +0.8 354,993 - +0.2 355,105 + +0.4 355,106 - -1.5 355,106 - -0.3 355,156 - -0.2 355,156 - -1.0 355,314 - arcB BNILDI_01840 0.11 -1.4 355,369 + arcB BNILDI_01840 0.13 -1.4 355,518 + arcB BNILDI_01840 0.19 -0.3 355,656 + arcB BNILDI_01840 0.25 +2.2 355,657 - arcB BNILDI_01840 0.25 -1.0 355,903 - arcB BNILDI_01840 0.36 -2.7 355,932 + arcB BNILDI_01840 0.37 -1.8 356,039 + arcB BNILDI_01840 0.42 -1.4 356,039 + arcB BNILDI_01840 0.42 +0.8 356,039 + arcB BNILDI_01840 0.42 +0.5 356,039 + arcB BNILDI_01840 0.42 +2.4 356,040 - arcB BNILDI_01840 0.42 -2.4 356,388 + arcB BNILDI_01840 0.57 -1.2 356,482 - arcB BNILDI_01840 0.61 -0.6 356,930 - arcB BNILDI_01840 0.80 -1.7 357,076 + arcB BNILDI_01840 0.86 -0.2 357,188 + +1.7 357,189 - +0.2 357,234 + +0.8 357,287 - -0.9 357,368 + -0.2 357,368 + -2.0 357,368 + -0.6 357,369 - +0.8 357,369 - -1.7 357,369 - +1.2 357,369 - +0.6 357,451 + +1.3 357,451 + +2.7 357,452 - +1.9 357,452 - +0.1 357,458 + -0.9 357,459 - +0.9 357,541 - +3.9 357,672 - yhcC BNILDI_01845 0.19 -0.1 357,704 - yhcC BNILDI_01845 0.22 -0.9 357,756 - yhcC BNILDI_01845 0.28 +0.4 357,774 - yhcC BNILDI_01845 0.30 -0.1 357,774 - yhcC BNILDI_01845 0.30 -0.0 357,793 - yhcC BNILDI_01845 0.32 -0.2 357,793 - yhcC BNILDI_01845 0.32 +1.9 357,874 - yhcC BNILDI_01845 0.41 -0.5 357,874 - yhcC BNILDI_01845 0.41 -1.4 357,874 - yhcC BNILDI_01845 0.41 +0.1 357,874 - yhcC BNILDI_01845 0.41 +0.8 357,874 - yhcC BNILDI_01845 0.41 +0.8 357,920 + yhcC BNILDI_01845 0.46 +0.3 357,921 - yhcC BNILDI_01845 0.46 -1.5 357,987 + yhcC BNILDI_01845 0.53 +0.5 358,026 - yhcC BNILDI_01845 0.57 -1.6 358,097 + yhcC BNILDI_01845 0.65 +0.4 358,123 + yhcC BNILDI_01845 0.68 -1.1 358,124 - yhcC BNILDI_01845 0.68 -0.1 358,127 + yhcC BNILDI_01845 0.68 -0.3 358,163 + yhcC BNILDI_01845 0.72 -0.1 358,186 + yhcC BNILDI_01845 0.74 -0.0 358,280 + yhcC BNILDI_01845 0.84 +0.4 358,311 - yhcC BNILDI_01845 0.88 +0.4 358,355 + +0.0 358,356 - -1.0
Or see this region's nucleotide sequence