Experiment: Bas05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rlmG and ygjP are separated by 84 nucleotides ygjP and ygjQ are separated by 76 nucleotides ygjQ and ygjR are separated by 78 nucleotides
BNILDI_01155: rlmG - 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG, at 227,945 to 229,081
rlmG
BNILDI_01160: ygjP - UTP pyrophosphatase, at 229,166 to 229,669
ygjP
BNILDI_01165: ygjQ - Uncharacterized protein YgjQ, at 229,746 to 230,429
ygjQ
BNILDI_01170: ygjR - Uncharacterized oxidoreductase YgjR, at 230,508 to 231,494
ygjR
Position (kb) 229
230
231 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 228.861 kb on + strand, within rlmG at 228.861 kb on + strand, within rlmG at 228.862 kb on - strand, within rlmG at 228.886 kb on + strand, within rlmG at 228.887 kb on - strand, within rlmG at 228.908 kb on + strand, within rlmG at 228.981 kb on + strand at 228.981 kb on + strand at 229.044 kb on - strand at 229.044 kb on - strand at 229.044 kb on - strand at 229.135 kb on + strand at 229.137 kb on + strand at 229.138 kb on - strand at 229.177 kb on + strand at 229.178 kb on - strand at 229.178 kb on - strand at 229.178 kb on - strand at 229.181 kb on + strand at 229.206 kb on + strand at 229.207 kb on - strand at 229.286 kb on + strand, within ygjP at 229.374 kb on - strand, within ygjP at 229.374 kb on - strand, within ygjP at 229.374 kb on - strand, within ygjP at 229.413 kb on + strand, within ygjP at 229.417 kb on + strand, within ygjP at 229.418 kb on - strand, within ygjP at 229.514 kb on - strand, within ygjP at 229.514 kb on - strand, within ygjP at 229.602 kb on - strand, within ygjP at 229.769 kb on + strand at 229.770 kb on - strand at 229.770 kb on - strand at 229.793 kb on + strand at 229.818 kb on - strand, within ygjQ at 229.854 kb on - strand, within ygjQ at 229.910 kb on + strand, within ygjQ at 229.911 kb on - strand, within ygjQ at 229.951 kb on - strand, within ygjQ at 229.965 kb on - strand, within ygjQ at 229.965 kb on - strand, within ygjQ at 229.986 kb on + strand, within ygjQ at 230.017 kb on + strand, within ygjQ at 230.017 kb on + strand, within ygjQ at 230.017 kb on + strand, within ygjQ at 230.061 kb on - strand, within ygjQ at 230.236 kb on - strand, within ygjQ at 230.293 kb on - strand, within ygjQ at 230.294 kb on + strand, within ygjQ at 230.428 kb on - strand at 230.435 kb on - strand at 230.435 kb on - strand at 230.467 kb on + strand at 230.468 kb on - strand at 230.468 kb on - strand at 230.512 kb on + strand at 230.512 kb on + strand at 230.513 kb on - strand at 230.579 kb on + strand at 230.709 kb on + strand, within ygjR at 230.709 kb on + strand, within ygjR at 230.712 kb on - strand, within ygjR at 230.870 kb on + strand, within ygjR at 230.961 kb on + strand, within ygjR at 231.011 kb on + strand, within ygjR at 231.039 kb on - strand, within ygjR at 231.055 kb on - strand, within ygjR at 231.134 kb on - strand, within ygjR at 231.333 kb on - strand, within ygjR at 231.333 kb on - strand, within ygjR at 231.333 kb on - strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.335 kb on + strand, within ygjR at 231.336 kb on - strand, within ygjR at 231.336 kb on - strand, within ygjR at 231.336 kb on - strand, within ygjR at 231.338 kb on + strand, within ygjR at 231.339 kb on - strand, within ygjR at 231.348 kb on + strand, within ygjR
Per-strain Table
Position Strand Gene LocusTag Fraction Bas05 remove 228,861 + rlmG BNILDI_01155 0.81 -0.1 228,861 + rlmG BNILDI_01155 0.81 +1.1 228,862 - rlmG BNILDI_01155 0.81 +0.9 228,886 + rlmG BNILDI_01155 0.83 -0.6 228,887 - rlmG BNILDI_01155 0.83 -0.6 228,908 + rlmG BNILDI_01155 0.85 +2.1 228,981 + +0.5 228,981 + -0.2 229,044 - -0.2 229,044 - +2.0 229,044 - -0.6 229,135 + +0.0 229,137 + +0.1 229,138 - -0.1 229,177 + +0.5 229,178 - +0.0 229,178 - -0.1 229,178 - -0.6 229,181 + +1.4 229,206 + +0.1 229,207 - -0.2 229,286 + ygjP BNILDI_01160 0.24 -0.4 229,374 - ygjP BNILDI_01160 0.41 -0.7 229,374 - ygjP BNILDI_01160 0.41 -1.1 229,374 - ygjP BNILDI_01160 0.41 +0.3 229,413 + ygjP BNILDI_01160 0.49 +0.4 229,417 + ygjP BNILDI_01160 0.50 +0.1 229,418 - ygjP BNILDI_01160 0.50 -0.9 229,514 - ygjP BNILDI_01160 0.69 -1.4 229,514 - ygjP BNILDI_01160 0.69 -0.8 229,602 - ygjP BNILDI_01160 0.87 +1.0 229,769 + -0.1 229,770 - +0.1 229,770 - -0.4 229,793 + +0.5 229,818 - ygjQ BNILDI_01165 0.11 -1.0 229,854 - ygjQ BNILDI_01165 0.16 +0.2 229,910 + ygjQ BNILDI_01165 0.24 -1.4 229,911 - ygjQ BNILDI_01165 0.24 -1.0 229,951 - ygjQ BNILDI_01165 0.30 -0.0 229,965 - ygjQ BNILDI_01165 0.32 +0.7 229,965 - ygjQ BNILDI_01165 0.32 -0.3 229,986 + ygjQ BNILDI_01165 0.35 +1.5 230,017 + ygjQ BNILDI_01165 0.40 -0.1 230,017 + ygjQ BNILDI_01165 0.40 -0.4 230,017 + ygjQ BNILDI_01165 0.40 +1.1 230,061 - ygjQ BNILDI_01165 0.46 +0.1 230,236 - ygjQ BNILDI_01165 0.72 -0.1 230,293 - ygjQ BNILDI_01165 0.80 -0.8 230,294 + ygjQ BNILDI_01165 0.80 -0.8 230,428 - +0.9 230,435 - +0.5 230,435 - -1.5 230,467 + -0.0 230,468 - -0.3 230,468 - +0.9 230,512 + +0.3 230,512 + -0.2 230,513 - +0.1 230,579 + -0.3 230,709 + ygjR BNILDI_01170 0.20 +0.1 230,709 + ygjR BNILDI_01170 0.20 +0.3 230,712 - ygjR BNILDI_01170 0.21 +1.8 230,870 + ygjR BNILDI_01170 0.37 -2.9 230,961 + ygjR BNILDI_01170 0.46 +0.5 231,011 + ygjR BNILDI_01170 0.51 +0.3 231,039 - ygjR BNILDI_01170 0.54 +1.1 231,055 - ygjR BNILDI_01170 0.55 -0.4 231,134 - ygjR BNILDI_01170 0.63 -0.9 231,333 - ygjR BNILDI_01170 0.84 +0.4 231,333 - ygjR BNILDI_01170 0.84 +1.0 231,333 - ygjR BNILDI_01170 0.84 +0.5 231,335 + ygjR BNILDI_01170 0.84 +0.1 231,335 + ygjR BNILDI_01170 0.84 -0.5 231,335 + ygjR BNILDI_01170 0.84 -3.0 231,335 + ygjR BNILDI_01170 0.84 -0.1 231,335 + ygjR BNILDI_01170 0.84 +0.2 231,335 + ygjR BNILDI_01170 0.84 +2.7 231,335 + ygjR BNILDI_01170 0.84 -1.0 231,335 + ygjR BNILDI_01170 0.84 +0.2 231,336 - ygjR BNILDI_01170 0.84 +3.8 231,336 - ygjR BNILDI_01170 0.84 -0.2 231,336 - ygjR BNILDI_01170 0.84 -0.1 231,338 + ygjR BNILDI_01170 0.84 -0.3 231,339 - ygjR BNILDI_01170 0.84 +0.3 231,348 + ygjR BNILDI_01170 0.85 -0.4
Or see this region's nucleotide sequence