Strain Fitness in Variovorax sp. SCN45 around GFF810

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
114,864	+		GFF809	0.71	+0.9
114,864	+		GFF809	0.71	+0.8
114,864	+		GFF809	0.71	-1.9
114,865	-		GFF809	0.71	-2.0
114,865	-		GFF809	0.71	-2.4
114,865	-		GFF809	0.71	-3.4
114,865	-		GFF809	0.71	+0.2
114,865	-		GFF809	0.71	+1.1
115,268	+				-1.4
115,268	+				-0.8
115,269	-				+0.1
115,269	-				-0.1
115,269	-				-2.2
115,269	-				-0.6
115,269	-				-1.4
115,269	-				-0.9
115,404	+				-1.6
115,404	+				+1.0
115,405	-				+0.3
115,405	-				-0.2
115,405	-				-0.4
115,405	-				-1.2
115,483	+				-0.7
115,483	+				-0.7
115,483	+				-2.7
115,483	+				-1.6
115,483	+				-0.6
115,483	+				+0.4
115,484	-				-1.6
115,484	-				-3.9
115,700	+				-0.4
115,700	+				-3.7
115,700	+				-0.8
115,700	+				-1.0
115,701	-				+1.0
115,701	-				+0.3
115,701	-				-1.7
115,701	-				+2.5
115,701	-				-0.1
115,701	-				-0.2
115,701	-				-1.3
115,718	+				-1.1
115,718	+				-0.1
115,718	+				+0.3
115,718	+				+0.0
115,718	+				+0.7
115,718	+				-1.8
115,718	+				-0.8
115,719	-				-1.0
115,719	-				+0.9
115,719	-				+2.6
115,719	-				-2.4
115,719	-				-1.4
115,719	-				-0.4
115,980	+		GFF810	0.38	+1.1
115,980	+		GFF810	0.38	+1.9
115,980	+		GFF810	0.38	+0.9
115,980	+		GFF810	0.38	+0.5
115,981	-		GFF810	0.38	-1.7
115,981	-		GFF810	0.38	-2.2
115,981	-		GFF810	0.38	-0.6
115,981	-		GFF810	0.38	-0.5
116,244	+		GFF810	0.79	+0.9
116,361	+				+0.6
116,361	+				+1.5
116,361	+				-0.8
116,361	+				+1.6
116,362	-				+0.2
116,362	-				-1.1
116,421	+				-0.7
116,421	+				+0.1
116,421	+				-0.7
116,422	-				-1.1
116,422	-				-1.7
116,423	+				-0.9
116,423	+				+1.1
116,423	+				-1.4
116,423	+				-0.5
116,423	+				-1.9
116,423	+				+0.3
116,424	-				+1.1
116,424	-				-0.4
116,424	-				-2.7
116,424	-				-2.7
116,424	-				-0.6
116,547	+		GFF811	0.16	+0.3
116,547	+		GFF811	0.16	-0.3
116,547	+		GFF811	0.16	-2.5
116,548	-		GFF811	0.16	-0.4
116,548	-		GFF811	0.16	-2.9
116,548	-		GFF811	0.16	-1.7
116,628	+		GFF811	0.26	-0.6
116,628	+		GFF811	0.26	-1.6
116,629	-		GFF811	0.26	+0.7
116,629	-		GFF811	0.26	-1.4
116,629	-		GFF811	0.26	-1.8
116,629	-		GFF811	0.26	-0.3
116,648	+		GFF811	0.28	+0.0
116,648	+		GFF811	0.28	-2.4
116,775	+		GFF811	0.42	-4.0
116,775	+		GFF811	0.42	+0.5
116,775	+		GFF811	0.42	-4.2
116,775	+		GFF811	0.42	-0.1
116,775	+		GFF811	0.42	-0.4
116,775	+		GFF811	0.42	-1.6
116,776	-		GFF811	0.42	+0.4
116,776	-		GFF811	0.42	+0.4
116,776	-		GFF811	0.42	+1.4
116,776	-		GFF811	0.42	+0.4
116,875	-		GFF811	0.54	-3.8
116,875	-		GFF811	0.54	+1.3
116,875	-		GFF811	0.54	-1.6
116,901	+		GFF811	0.57	-1.8
116,901	+		GFF811	0.57	+0.9
116,901	+		GFF811	0.57	-0.8
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	+0.8
116,901	+		GFF811	0.57	-1.6
116,901	+		GFF811	0.57	-3.7
116,901	+		GFF811	0.57	-0.2
116,901	+		GFF811	0.57	-1.4
116,901	+		GFF811	0.57	-0.4
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	-0.4
116,901	+		GFF811	0.57	+0.9
116,901	+		GFF811	0.57	+0.9
116,901	+		GFF811	0.57	+2.2
116,902	-		GFF811	0.57	-2.6
116,902	-		GFF811	0.57	+0.1
116,902	-		GFF811	0.57	-1.2
116,902	-		GFF811	0.57	-0.2
116,902	-		GFF811	0.57	+0.4
116,902	-		GFF811	0.57	+0.7
116,902	-		GFF811	0.57	+0.2
116,902	-		GFF811	0.57	-0.7
116,902	-		GFF811	0.57	-0.1
116,902	-		GFF811	0.57	-1.2
116,902	-		GFF811	0.57	+0.6
116,902	-		GFF811	0.57	+0.4
116,902	-		GFF811	0.57	+0.2
116,902	-		GFF811	0.57	-0.2
116,902	-		GFF811	0.57	+0.1
116,902	-		GFF811	0.57	+1.1
116,907	+		GFF811	0.57	-1.7
116,907	+		GFF811	0.57	-0.2
116,907	+		GFF811	0.57	+1.5
116,907	+		GFF811	0.57	-1.9
116,907	+		GFF811	0.57	+0.5
116,907	+		GFF811	0.57	-0.4
116,907	+		GFF811	0.57	-1.1
116,907	+		GFF811	0.57	+0.0
116,908	-		GFF811	0.57	-1.6
116,908	-		GFF811	0.57	+0.9
116,908	-		GFF811	0.57	+0.6
116,908	-		GFF811	0.57	-1.7
116,908	-		GFF811	0.57	-2.3
116,908	-		GFF811	0.57	-0.5
116,908	-		GFF811	0.57	-0.6
116,908	-		GFF811	0.57	+0.8
116,928	+		GFF811	0.60	-0.1
116,929	-		GFF811	0.60	-2.6
116,929	-		GFF811	0.60	+1.5
116,929	-		GFF811	0.60	-3.2
117,003	+		GFF811	0.68	+1.8
117,004	-		GFF811	0.68	-0.6
117,004	-		GFF811	0.68	+1.9
117,004	-		GFF811	0.68	+1.4
117,021	+		GFF811	0.70	-1.3
117,021	+		GFF811	0.70	-1.0
117,021	+		GFF811	0.70	-1.3
117,021	+		GFF811	0.70	-0.0
117,022	-		GFF811	0.70	-2.9
117,022	-		GFF811	0.70	-0.8
117,022	-		GFF811	0.70	+0.3
117,022	-		GFF811	0.70	+1.2
117,022	-		GFF811	0.70	-0.9
117,054	+		GFF811	0.74	-0.7
117,054	+		GFF811	0.74	+0.8
117,081	+		GFF811	0.77	-1.1
117,082	-		GFF811	0.77	-0.9
117,082	-		GFF811	0.77	+0.9
117,082	-		GFF811	0.77	-0.2
117,082	-		GFF811	0.77	-3.1
117,082	-		GFF811	0.77	+0.2
117,082	-		GFF811	0.77	-2.5
117,114	+		GFF811	0.81	+0.6
117,114	+		GFF811	0.81	-2.6
117,115	-		GFF811	0.81	+0.9
117,115	-		GFF811	0.81	-3.5
117,333	+				-3.0
117,333	+				+0.3
117,333	+				-0.6
117,333	+				-0.0
117,334	-				-0.1
117,334	-				-0.9
117,334	-				-0.4
117,334	-				-3.3
117,334	-				+1.3
117,334	-				-1.3
117,334	-				-1.9
117,334	-				-1.5
117,342	+				-1.8
117,342	+				+0.3
117,342	+				-1.7
117,343	-				-0.9
117,343	-				+3.1