Strain Fitness in Variovorax sp. SCN45 around GFF792

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
83,503	+		GFF790	0.38	+0.3
83,503	+		GFF790	0.38	-2.6
83,503	+		GFF790	0.38	-0.7
83,504	-		GFF790	0.38	+0.4
83,504	-		GFF790	0.38	+2.2
83,632	+		GFF790	0.57	+3.3
83,633	-		GFF790	0.57	+0.9
83,633	-		GFF790	0.57	+2.0
83,726	+		GFF790	0.71	+2.5
83,726	+		GFF790	0.71	-0.2
83,727	-		GFF790	0.71	-1.0
83,727	-		GFF790	0.71	+2.7
83,727	-		GFF790	0.71	-1.6
83,978	+				-1.3
83,979	-				+1.0
84,107	+		GFF791	0.33	-1.7
84,107	+		GFF791	0.33	+0.3
84,107	+		GFF791	0.33	+0.8
84,107	+		GFF791	0.33	-2.0
84,107	+		GFF791	0.33	+0.9
84,108	-		GFF791	0.33	-0.7
84,108	-		GFF791	0.33	-1.9
84,108	-		GFF791	0.33	+0.9
84,137	+		GFF791	0.39	-0.7
84,137	+		GFF791	0.39	-0.7
84,138	-		GFF791	0.39	-0.2
84,465	-				-1.7
84,496	+				-0.9
84,496	+				-0.9
84,496	+				+2.0
84,496	+				-0.0
84,497	-				-3.4
84,497	-				-0.9
84,497	-				-0.9
84,497	-				+0.5
84,497	-				-4.2
84,497	-				+1.5
84,502	+				-2.1
84,502	+				-0.5
84,502	+				+0.2
84,502	+				-0.3
84,503	-				-1.6
84,503	-				-3.0
84,503	-				-0.4
84,503	-				-0.1
84,846	-		GFF792	0.35	-1.3
84,846	-		GFF792	0.35	-2.0
85,039	+		GFF792	0.54	-3.5
85,040	-		GFF792	0.54	-1.3
85,040	-		GFF792	0.54	+1.0
85,040	-		GFF792	0.54	-1.3
85,040	-		GFF792	0.54	+1.6
85,220	+		GFF792	0.72	-0.2
85,220	+		GFF792	0.72	-1.6
85,221	-		GFF792	0.72	+1.2
85,221	-		GFF792	0.72	-3.4
85,221	-		GFF792	0.72	-0.2
85,454	+				-0.1
85,454	+				-0.7
85,454	+				-0.1
85,454	+				-0.7
85,454	+				-0.7
85,455	-				+0.1
85,455	-				-1.7
85,455	-				-1.6
85,498	+				+3.0
85,498	+				+0.4
85,498	+				+1.9
85,498	+				-0.3
85,499	-				-4.0
85,499	-				-1.0
85,499	-				+1.4
85,499	-				-1.3
85,499	-				+0.0
85,499	-				-1.1
85,499	-				+0.7
85,630	+				+1.6
85,631	-				-2.0
86,447	+				+0.3
86,447	+				+0.6
86,447	+				-3.5
86,448	-				-0.9