Strain Fitness in Variovorax sp. SCN45 around GFF749

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
11,531	+		GFF747	0.84	-0.0
11,531	+		GFF747	0.84	-2.4
11,532	-		GFF747	0.85	+0.6
11,532	-		GFF747	0.85	-2.0
11,567	+		GFF747	0.87	-1.7
11,567	+		GFF747	0.87	-0.3
11,568	-		GFF747	0.87	-1.2
11,568	-		GFF747	0.87	-1.0
11,759	+				-1.8
11,760	-				+0.3
11,760	-				-0.7
11,798	+				+1.2
11,798	+				+3.0
11,798	+				+0.9
11,798	+				+0.9
11,798	+				+1.6
11,798	+				-2.2
11,798	+				-2.2
11,798	+				-3.0
11,799	-				-2.0
11,799	-				-0.8
11,799	-				+0.3
11,799	-				-1.4
11,799	-				-1.1
11,799	-				-1.5
11,799	-				-0.8
11,799	-				-2.8
12,515	-				-0.2
12,515	-				-1.7
12,515	-				+2.7
12,562	+		GFF749	0.11	-1.9
12,563	-		GFF749	0.11	+3.5
12,563	-		GFF749	0.11	+0.1
12,580	+		GFF749	0.13	-0.5
12,694	+		GFF749	0.24	+1.1
12,695	-		GFF749	0.24	-1.1
12,695	-		GFF749	0.24	-1.4
12,695	-		GFF749	0.24	-0.8
12,790	+		GFF749	0.33	-1.8
13,453	+				-1.4
13,454	-				-0.1
13,560	+				+1.5
13,560	+				+0.8
13,560	+				+1.7
13,560	+				-0.3
13,561	-				-1.3
14,208	+		GFF750	0.44	+1.1
14,209	-		GFF750	0.44	-2.9
14,209	-		GFF750	0.44	-1.4
14,394	+		GFF750	0.58	-0.2
14,395	-		GFF750	0.59	-2.2
14,395	-		GFF750	0.59	-1.1