Strain Fitness in Variovorax sp. SCN45 around GFF7342

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
9,322	-		GFF7340	0.49	-1.8
9,322	-		GFF7340	0.49	-0.8
9,427	-		GFF7340	0.59	-2.4
9,427	-		GFF7340	0.59	+1.3
9,594	+		GFF7340	0.74	+0.0
9,625	-		GFF7340	0.77	+1.2
9,625	-		GFF7340	0.77	+0.6
9,842	-				-1.5
9,975	+				+1.1
9,976	-				-1.4
9,976	-				-0.3
10,042	+				+2.3
10,043	-				-2.3
10,525	+		GFF7342	0.22	+2.2
10,552	+		GFF7342	0.24	+3.0
10,553	-		GFF7342	0.24	-0.3
11,020	+		GFF7342	0.56	+1.8
11,021	-		GFF7342	0.56	-2.0
11,021	-		GFF7342	0.56	-0.8
11,029	+		GFF7342	0.56	+1.5
11,029	+		GFF7342	0.56	-2.8
11,029	+		GFF7342	0.56	-0.1
11,443	+		GFF7342	0.85	+0.9
11,443	+		GFF7342	0.85	-2.5
11,443	+		GFF7342	0.85	+1.3
11,444	-		GFF7342	0.85	+0.5
11,617	+				+0.7
11,617	+				+0.4
11,741	+				-0.4
11,742	-				-0.4
11,856	+				-2.3
12,556	-		GFF7344	0.33	+0.3
12,605	+		GFF7344	0.38	+3.2
12,605	+		GFF7344	0.38	+1.4
12,606	-		GFF7344	0.38	-0.3