Strain Fitness in Variovorax sp. SCN45 around GFF7260

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
6,568	-				-0.0
6,568	-				+1.4
6,591	+				+0.1
6,592	-				+0.2
6,823	+		GFF7259	0.17	-1.7
6,823	+		GFF7259	0.17	+0.8
6,824	-		GFF7259	0.17	+1.8
7,125	+		GFF7259	0.53	+0.6
7,207	+		GFF7259	0.63	-2.5
7,207	+		GFF7259	0.63	+1.4
7,208	-		GFF7259	0.63	-1.0
7,208	-		GFF7259	0.63	-0.8
7,261	+		GFF7259	0.70	+1.6
7,551	+				+2.3
7,552	-				-0.5
7,555	+				+0.1
7,859	-		GFF7260	0.71	+1.6
7,900	+		GFF7260	0.80	+1.1
7,901	-		GFF7260	0.80	-0.4
7,901	-		GFF7260	0.80	+0.8
7,901	-		GFF7260	0.80	-0.8
8,333	+		GFF7261	0.24	-0.5