Strain Fitness in Variovorax sp. SCN45 around GFF7076

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
110	+		GFF7076	0.80	-2.1
110	+		GFF7076	0.80	-0.9
111	-		GFF7076	0.81	-0.1
354	+		GFF7077	0.55	-0.7
354	+		GFF7077	0.55	-0.9
534	+				-1.0
534	+				+0.6
534	+				+1.5
534	+				-0.5
534	+				+1.4
534	+				+0.1
535	-				+0.2
535	-				-2.3
535	-				+0.4
535	-				+0.9
535	-				-0.0
535	-				+0.1
535	-				-1.0
551	+				-2.4
551	+				-2.8
551	+				-1.3
551	+				-1.1
552	-				-1.6
673	+				+0.9
673	+				-0.3
673	+				+1.0
673	+				-2.2
674	-				+0.9
773	-		GFF7078	0.59	+0.4
773	-		GFF7078	0.59	-2.5
851	+				-2.1
851	+				-2.6
851	+				-0.0
851	+				+0.5
852	-				-2.2
852	-				-0.6
871	-				+0.3
871	-				-3.5
997	-		GFF7079	0.44	+0.5