Strain Fitness in Variovorax sp. SCN45 around GFF4965

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
65,546	+		GFF4964	0.67	+0.8
65,546	+		GFF4964	0.67	+0.9
65,546	+		GFF4964	0.67	-0.9
65,547	-		GFF4964	0.67	-1.9
65,757	-		GFF4964	0.81	+0.3
65,757	-		GFF4964	0.81	-0.5
66,043	+				-0.9
66,043	+				-1.2
66,044	-				+1.9
66,259	+				-1.8
66,260	-				-0.0
66,260	-				+0.5
66,260	-				-0.9
66,260	-				+1.4
66,335	+				-1.2
66,335	+				+0.4
66,494	+		GFF4965	0.30	+2.2
66,494	+		GFF4965	0.30	+2.4
66,671	+		GFF4965	0.54	-0.9
66,671	+		GFF4965	0.54	+0.4
67,031	+				+0.4
67,031	+				-1.1
67,174	+		GFF4966	0.38	-0.7
67,174	+		GFF4966	0.38	-1.6
67,175	-		GFF4966	0.38	+0.6
67,175	-		GFF4966	0.38	-1.3
67,175	-		GFF4966	0.38	-0.6
67,337	+				-2.1
67,338	-				+0.2
67,428	+				-0.8
67,428	+				+0.4
67,428	+				-2.3
67,429	-				-1.1
67,429	-				+0.9
67,429	-				+0.2
67,429	-				-1.5
67,450	+				-0.8
67,451	-				-1.5
67,451	-				-0.6
67,451	-				-0.6
67,512	+				-1.2
67,512	+				-3.9
67,512	+				-0.1
67,512	+				-1.1
67,512	+				-0.4
67,648	+				-2.6
67,649	-				+0.9
67,649	-				-1.8
67,818	-				-0.1