Strain Fitness in Variovorax sp. SCN45 around GFF1939

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
631,836	+				+0.3
631,837	-				-1.1
631,837	-				+2.1
631,837	-				-1.5
633,209	-		GFF1939	0.44	+0.8
633,223	+		GFF1939	0.46	+0.9
633,223	+		GFF1939	0.46	+0.2
633,224	-		GFF1939	0.46	-1.0
633,224	-		GFF1939	0.46	+0.3
633,224	-		GFF1939	0.46	-0.2
633,224	-		GFF1939	0.46	-0.4
633,224	-		GFF1939	0.46	+2.2