Strain Fitness in Variovorax sp. SCN45 around GFF1426

Experiment: Community=Kojac gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=4
16,125	-		GFF1424	0.89	+0.2
16,125	-		GFF1424	0.89	-2.4
16,235	+				+1.6
16,236	-				-0.1
16,236	-				+2.4
16,988	+				-1.8
17,351	+		GFF1426	0.51	-0.8
17,352	-		GFF1426	0.51	-1.2
17,352	-		GFF1426	0.51	-1.6
17,352	-		GFF1426	0.51	-1.5
17,352	-		GFF1426	0.51	+2.9
17,612	+		GFF1426	0.87	-0.1
17,612	+		GFF1426	0.87	-1.9
17,612	+		GFF1426	0.87	+0.9
17,613	-		GFF1426	0.87	+0.3
17,690	+				+0.3
17,690	+				-2.1
17,822	-		GFF1427	0.10	+0.7
17,859	+		GFF1427	0.14	-2.8
17,859	+		GFF1427	0.14	-1.9
17,860	-		GFF1427	0.14	+2.2
17,860	-		GFF1427	0.14	-0.8
17,860	-		GFF1427	0.14	+1.5
17,872	-		GFF1427	0.15	-1.3
17,967	+		GFF1427	0.24	+0.0
17,968	-		GFF1427	0.24	+0.3
18,436	+		GFF1427	0.67	-0.1
18,600	-		GFF1427	0.82	-1.2