Strain Fitness in Variovorax sp. SCN45 around GFF806

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
109,618	+		GFF805	0.11	-2.6
109,618	+		GFF805	0.11	-0.4
109,619	-		GFF805	0.11	-1.0
109,619	-		GFF805	0.11	+0.2
109,663	+		GFF805	0.16	-2.9
109,663	+		GFF805	0.16	-0.8
109,663	+		GFF805	0.16	+0.2
109,663	+		GFF805	0.16	+0.2
109,664	-		GFF805	0.16	-1.9
109,688	-		GFF805	0.18	-1.3
109,688	-		GFF805	0.18	-1.5
109,688	-		GFF805	0.18	-1.2
109,688	-		GFF805	0.18	+0.2
109,688	-		GFF805	0.18	-2.2
109,688	-		GFF805	0.18	+1.1
109,831	+		GFF805	0.34	+0.3
109,832	-		GFF805	0.34	+0.0
109,832	-		GFF805	0.34	-1.4
110,110	+		GFF805	0.65	-2.1
110,110	+		GFF805	0.65	+0.8
110,110	+		GFF805	0.65	-1.5
110,110	+		GFF805	0.65	-1.0
110,111	-		GFF805	0.65	-1.2
110,111	-		GFF805	0.65	-1.7
110,111	-		GFF805	0.65	+0.1
110,111	-		GFF805	0.65	+0.4
110,248	+		GFF805	0.80	+0.0
110,411	+				-0.5
110,411	+				+0.0
110,411	+				-1.2
110,411	+				-1.0
110,412	-				-0.2
110,412	-				-1.0
110,412	-				-2.8
110,412	-				+0.6
110,412	-				-3.0
110,412	-				-0.4
110,412	-				-1.1
110,442	+				+0.3
110,442	+				-2.0
110,442	+				-0.8
110,442	+				+0.6
110,442	+				-0.5
110,443	-				-0.2
110,443	-				+0.7
110,443	-				+0.4
110,468	+				-1.8
110,468	+				+0.3
110,468	+				-0.0
110,468	+				-2.5
110,468	+				+0.9
110,468	+				-1.5
110,468	+				-2.1
110,469	-				-2.2
110,472	+				-1.2
110,472	+				+3.2
110,472	+				+0.7
110,472	+				-2.4
110,473	-				+0.6
110,473	-				-0.8
110,473	-				+0.1
110,473	-				-1.0
110,473	-				-1.6
110,532	+		GFF806	0.12	+2.3
110,532	+		GFF806	0.12	-1.0
110,532	+		GFF806	0.12	-2.0
110,538	+		GFF806	0.13	-0.5
110,538	+		GFF806	0.13	-2.1
110,538	+		GFF806	0.13	-2.2
110,538	+		GFF806	0.13	-0.7
110,538	+		GFF806	0.13	-3.6
110,538	+		GFF806	0.13	+0.9
110,538	+		GFF806	0.13	+0.3
110,538	+		GFF806	0.13	-0.1
110,538	+		GFF806	0.13	-1.0
110,539	-		GFF806	0.13	-1.7
110,539	-		GFF806	0.13	-0.5
110,539	-		GFF806	0.13	-2.1
110,539	-		GFF806	0.13	-0.1
110,539	-		GFF806	0.13	-3.1
110,539	-		GFF806	0.13	-1.3
110,539	-		GFF806	0.13	-0.4
110,583	+		GFF806	0.20	+0.9
110,584	-		GFF806	0.20	-1.1
110,584	-		GFF806	0.20	-0.1
110,667	+		GFF806	0.33	+0.3
110,667	+		GFF806	0.33	-1.2
110,667	+		GFF806	0.33	+0.1
110,668	-		GFF806	0.33	-0.7
110,668	-		GFF806	0.33	-0.5
110,668	-		GFF806	0.33	-1.3
110,668	-		GFF806	0.33	+0.6
110,668	-		GFF806	0.33	-1.5
110,796	+		GFF806	0.53	-2.5
110,796	+		GFF806	0.53	+2.3
110,796	+		GFF806	0.53	-0.2
110,796	+		GFF806	0.53	-0.9
110,796	+		GFF806	0.53	-0.2
110,797	-		GFF806	0.53	-2.4
110,797	-		GFF806	0.53	-3.3
110,797	-		GFF806	0.53	-0.5
110,913	+		GFF806	0.71	+2.5
110,913	+		GFF806	0.71	-0.6
110,913	+		GFF806	0.71	-2.5
110,913	+		GFF806	0.71	-1.7
110,913	+		GFF806	0.71	+1.5
110,913	+		GFF806	0.71	-1.2
110,913	+		GFF806	0.71	-0.1
110,914	-		GFF806	0.72	-1.0
110,914	-		GFF806	0.72	-1.0
110,914	-		GFF806	0.72	-0.8
110,914	-		GFF806	0.72	-1.6
110,914	-		GFF806	0.72	-0.4
110,914	-		GFF806	0.72	-1.1
110,914	-		GFF806	0.72	-0.5
110,914	-		GFF806	0.72	-1.5
110,914	-		GFF806	0.72	+0.3
110,914	-		GFF806	0.72	-0.7
110,914	-		GFF806	0.72	-1.9
110,914	-		GFF806	0.72	+1.1
110,914	-		GFF806	0.72	-3.7
111,195	-		GFF807	0.12	-1.2
111,195	-		GFF807	0.12	-0.7
111,466	-		GFF807	0.48	-0.2
111,466	-		GFF807	0.48	+1.4
111,949	+				-1.0
111,949	+				-0.7
111,949	+				-1.5
111,950	-				+0.1
111,950	-				-1.6
111,950	-				-0.8
111,960	+				-0.7
111,960	+				+0.4
111,960	+				+0.3
111,961	-				-2.3
111,961	-				-2.5
111,961	-				+0.6
111,990	+				-3.3
112,071	+				-1.0
112,072	-				-0.2
112,072	-				-1.9
112,072	-				+0.7
112,072	-				-2.3
112,072	-				-1.5
112,072	-				-1.7
112,072	-				-1.7
112,072	-				+0.2